Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34425

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,149,598	-				-0.5
3,149,734	+		RR42_RS34420	0.10	+0.9
3,149,735	-		RR42_RS34420	0.11	+1.3
3,149,749	+		RR42_RS34420	0.12	-0.6
3,149,833	+		RR42_RS34420	0.23	-1.2
3,149,991	+		RR42_RS34420	0.43	-0.8
3,150,052	+		RR42_RS34420	0.51	-0.0
3,150,053	-		RR42_RS34420	0.51	-2.8
3,150,286	+		RR42_RS34420	0.81	-0.7
3,150,496	+				-1.5
3,150,497	-				-1.4
3,150,497	-				+0.4
3,150,497	-				+1.0
3,150,592	+				+0.7
3,150,592	+				+0.5
3,150,592	+				-0.1
3,150,593	-				-0.4
3,150,593	-				-0.2
3,151,226	-		RR42_RS34425	0.63	-0.6
3,151,228	+		RR42_RS34425	0.63	-0.4
3,151,228	+		RR42_RS34425	0.63	-1.0
3,151,358	-		RR42_RS34425	0.75	-1.4
3,151,759	+				-2.2
3,151,760	-				+1.5
3,151,760	-				+0.5
3,151,770	+				-0.3
3,151,771	-				-1.1
3,151,775	-				+0.9
3,152,060	-		RR42_RS34430	0.13	-0.3
3,152,153	+		RR42_RS34430	0.19	+0.4
3,152,153	+		RR42_RS34430	0.19	+0.5
3,152,267	+		RR42_RS34430	0.25	+1.2
3,152,267	+		RR42_RS34430	0.25	-2.2
3,152,268	-		RR42_RS34430	0.25	-0.0
3,152,268	-		RR42_RS34430	0.25	+1.2
3,152,495	+		RR42_RS34430	0.38	-0.7
3,152,496	-		RR42_RS34430	0.39	-1.5