Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34265

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,115,001	+		RR42_RS34260	0.20	+0.1
3,115,002	-		RR42_RS34260	0.20	-1.1
3,115,002	-		RR42_RS34260	0.20	+1.4
3,115,146	-		RR42_RS34260	0.34	+1.7
3,115,172	+		RR42_RS34260	0.37	+1.0
3,115,172	+		RR42_RS34260	0.37	-1.5
3,115,173	-		RR42_RS34260	0.37	-1.8
3,115,173	-		RR42_RS34260	0.37	-0.3
3,115,173	-		RR42_RS34260	0.37	-0.4
3,115,193	+		RR42_RS34260	0.39	+0.4
3,115,353	-		RR42_RS34260	0.54	-1.3
3,115,353	-		RR42_RS34260	0.54	-0.5
3,115,642	+		RR42_RS34260	0.82	+0.5
3,115,643	-		RR42_RS34260	0.83	-3.3
3,116,148	+		RR42_RS34265	0.55	+1.7
3,116,172	-		RR42_RS34265	0.61	+1.0
3,116,203	+		RR42_RS34265	0.69	+0.7
3,116,203	+		RR42_RS34265	0.69	+2.0
3,116,204	-		RR42_RS34265	0.69	-0.2
3,116,378	+				-1.4
3,116,378	+				+0.2
3,116,379	-				-0.2
3,116,379	-				-0.2
3,116,379	-				-0.3
3,116,399	+				-0.7
3,116,399	+				-2.6
3,116,407	-				+0.3
3,116,870	+		RR42_RS34270	0.26	+0.7
3,116,873	+		RR42_RS34270	0.26	-1.1
3,116,874	-		RR42_RS34270	0.26	-0.0
3,116,874	-		RR42_RS34270	0.26	-0.0
3,116,874	-		RR42_RS34270	0.26	+3.1
3,117,285	+		RR42_RS34270	0.47	-0.0
3,117,286	-		RR42_RS34270	0.47	+0.0
3,117,286	-		RR42_RS34270	0.47	+0.0