Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33925

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,037,589	+		RR42_RS33920	0.16	+1.1
3,037,839	+		RR42_RS33920	0.43	-0.1
3,037,948	+		RR42_RS33920	0.55	+0.4
3,037,949	-		RR42_RS33920	0.55	-2.1
3,037,949	-		RR42_RS33920	0.55	+0.0
3,038,321	+				+0.4
3,038,321	+				-1.9
3,038,321	+				-1.9
3,038,321	+				-3.3
3,038,322	-				+0.2
3,038,322	-				-0.1
3,038,463	+				+0.8
3,038,464	-				+1.4
3,038,464	-				+1.2
3,038,464	-				+0.5
3,038,487	+				-0.1
3,038,488	-				+0.8
3,038,576	+				-0.4
3,038,579	-		RR42_RS33925	0.10	-0.8
3,038,910	-		RR42_RS33925	0.44	-0.1
3,038,987	+		RR42_RS33925	0.51	+0.7
3,038,987	+		RR42_RS33925	0.51	+0.8
3,038,987	+		RR42_RS33925	0.51	+0.2
3,038,988	-		RR42_RS33925	0.51	-1.6
3,038,988	-		RR42_RS33925	0.51	-3.1
3,038,988	-		RR42_RS33925	0.51	+0.1
3,039,050	+		RR42_RS33925	0.58	+0.2
3,039,050	+		RR42_RS33925	0.58	+0.2
3,039,051	-		RR42_RS33925	0.58	-0.1
3,039,544	+				-0.8
3,039,600	+				-1.9
3,039,600	+				+0.9
3,039,600	+				+0.3
3,039,663	+		RR42_RS33930	0.11	-1.5
3,039,663	+		RR42_RS33930	0.11	-0.5
3,039,663	+		RR42_RS33930	0.11	-1.8
3,039,664	-		RR42_RS33930	0.11	-0.1
3,039,664	-		RR42_RS33930	0.11	-2.4
3,039,664	-		RR42_RS33930	0.11	+1.7
3,039,664	-		RR42_RS33930	0.11	-2.5
3,039,765	+		RR42_RS33930	0.19	-1.1
3,039,765	+		RR42_RS33930	0.19	+1.8
3,039,766	-		RR42_RS33930	0.19	+0.3
3,039,849	+		RR42_RS33930	0.26	+2.0
3,039,865	-		RR42_RS33930	0.27	-1.6
3,039,865	-		RR42_RS33930	0.27	+1.3
3,040,050	+		RR42_RS33930	0.42	+0.4
3,040,051	-		RR42_RS33930	0.42	-0.1
3,040,119	+		RR42_RS33930	0.47	+0.3
3,040,121	+		RR42_RS33930	0.47	-0.2
3,040,180	-		RR42_RS33930	0.52	-0.9
3,040,180	-		RR42_RS33930	0.52	+0.1
3,040,180	-		RR42_RS33930	0.52	-0.1