Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33920

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,036,629	+		RR42_RS33910	0.55	-3.3
3,036,630	-		RR42_RS33910	0.55	-0.8
3,036,952	+				-0.5
3,036,953	-				+0.9
3,036,972	-				+1.8
3,036,972	-				-0.6
3,036,975	+				-0.1
3,036,976	-				+0.9
3,037,028	+				+0.1
3,037,166	+		RR42_RS33915	0.29	-0.6
3,037,319	+		RR42_RS33915	0.76	-1.0
3,037,319	+		RR42_RS33915	0.76	+0.5
3,037,320	-		RR42_RS33915	0.76	-0.5
3,037,320	-		RR42_RS33915	0.76	+0.3
3,037,320	-		RR42_RS33915	0.76	-1.0
3,037,320	-		RR42_RS33915	0.76	+0.2
3,037,320	-		RR42_RS33915	0.76	-2.4
3,037,329	-		RR42_RS33915	0.79	+0.1
3,037,383	+				+0.8
3,037,386	+				+1.7
3,037,386	+				-0.1
3,037,386	+				-2.0
3,037,386	+				+0.5
3,037,387	-				-0.8
3,037,449	+				-1.9
3,037,450	-				-3.4
3,037,589	+		RR42_RS33920	0.16	+1.1
3,037,839	+		RR42_RS33920	0.43	-0.1
3,037,948	+		RR42_RS33920	0.55	+0.4
3,037,949	-		RR42_RS33920	0.55	-2.1
3,037,949	-		RR42_RS33920	0.55	+0.0
3,038,321	+				+0.4
3,038,321	+				-1.9
3,038,321	+				-1.9
3,038,321	+				-3.3
3,038,322	-				+0.2
3,038,322	-				-0.1
3,038,463	+				+0.8
3,038,464	-				+1.4
3,038,464	-				+1.2
3,038,464	-				+0.5
3,038,487	+				-0.1
3,038,488	-				+0.8
3,038,576	+				-0.4
3,038,579	-		RR42_RS33925	0.10	-0.8
3,038,910	-		RR42_RS33925	0.44	-0.1
3,038,987	+		RR42_RS33925	0.51	+0.7
3,038,987	+		RR42_RS33925	0.51	+0.8
3,038,987	+		RR42_RS33925	0.51	+0.2
3,038,988	-		RR42_RS33925	0.51	-1.6
3,038,988	-		RR42_RS33925	0.51	-3.1
3,038,988	-		RR42_RS33925	0.51	+0.1
3,039,050	+		RR42_RS33925	0.58	+0.2
3,039,050	+		RR42_RS33925	0.58	+0.2
3,039,051	-		RR42_RS33925	0.58	-0.1