Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33905

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,033,161	-		RR42_RS33895	0.36	-0.2
3,033,172	+		RR42_RS33895	0.38	+1.3
3,033,173	-		RR42_RS33895	0.38	-0.4
3,033,223	+		RR42_RS33895	0.43	-0.9
3,033,224	-		RR42_RS33895	0.43	-0.6
3,033,649	+		RR42_RS33895	0.90	-1.4
3,033,649	+		RR42_RS33895	0.90	+0.7
3,033,650	-		RR42_RS33895	0.90	-0.8
3,033,650	-		RR42_RS33895	0.90	+2.2
3,033,650	-		RR42_RS33895	0.90	+0.9
3,033,792	+		RR42_RS33900	0.24	+1.3
3,033,792	+		RR42_RS33900	0.24	-1.0
3,033,792	+		RR42_RS33900	0.24	-0.2
3,033,801	-		RR42_RS33900	0.29	-0.7
3,033,835	-		RR42_RS33900	0.45	+0.3
3,033,927	+		RR42_RS33900	0.88	+1.2
3,033,948	-				-0.3
3,033,948	-				+0.5
3,034,010	+				+0.4
3,034,011	-				+0.2
3,034,562	+		RR42_RS33905	0.30	+1.7
3,034,661	+		RR42_RS33905	0.34	-2.2
3,034,662	-		RR42_RS33905	0.35	+0.2
3,034,662	-		RR42_RS33905	0.35	-0.5
3,034,662	-		RR42_RS33905	0.35	-0.9
3,034,662	-		RR42_RS33905	0.35	+0.2
3,034,662	-		RR42_RS33905	0.35	-0.6
3,034,662	-		RR42_RS33905	0.35	-1.6
3,034,662	-		RR42_RS33905	0.35	+0.5
3,034,727	+		RR42_RS33905	0.38	-1.5
3,034,727	+		RR42_RS33905	0.38	-0.9
3,034,728	-		RR42_RS33905	0.38	+0.5
3,034,728	-		RR42_RS33905	0.38	+0.4
3,034,919	+		RR42_RS33905	0.47	+0.6
3,034,919	+		RR42_RS33905	0.47	+0.6
3,034,919	+		RR42_RS33905	0.47	-0.5
3,034,919	+		RR42_RS33905	0.47	-2.6
3,034,920	-		RR42_RS33905	0.47	-2.5
3,035,217	+		RR42_RS33905	0.61	-1.2
3,035,670	+		RR42_RS33905	0.83	+0.6
3,035,670	+		RR42_RS33905	0.83	+1.1
3,035,671	-		RR42_RS33905	0.83	-3.5
3,035,671	-		RR42_RS33905	0.83	-0.7
3,035,673	-		RR42_RS33905	0.83	-0.1
3,035,693	+		RR42_RS33905	0.84	-2.0
3,035,693	+		RR42_RS33905	0.84	-0.2
3,035,693	+		RR42_RS33905	0.84	-0.6
3,035,694	-		RR42_RS33905	0.84	+0.5
3,035,726	+		RR42_RS33905	0.86	-1.9
3,035,727	-		RR42_RS33905	0.86	-0.0
3,035,912	+				-0.0
3,035,945	+				+0.4
3,035,946	-				+0.1
3,035,946	-				-1.1
3,035,946	-				-1.5
3,036,013	-				-2.2
3,036,027	+				+0.9
3,036,045	+				+1.8
3,036,046	-				+0.0
3,036,058	+				+1.1
3,036,164	+				+0.3
3,036,165	-				-0.1
3,036,165	-				+1.4
3,036,335	+		RR42_RS33910	0.22	+1.2
3,036,336	-		RR42_RS33910	0.22	-0.5
3,036,629	+		RR42_RS33910	0.55	-3.3
3,036,630	-		RR42_RS33910	0.55	-0.8
3,036,952	+				-0.5
3,036,953	-				+0.9
3,036,972	-				+1.8
3,036,972	-				-0.6
3,036,975	+				-0.1
3,036,976	-				+0.9