Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33715

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,989,940	+				+1.3
2,989,940	+				-0.4
2,990,253	+		RR42_RS33710	0.31	-1.6
2,990,291	+		RR42_RS33710	0.36	-0.3
2,990,292	-		RR42_RS33710	0.36	-2.7
2,990,292	-		RR42_RS33710	0.36	-0.2
2,990,370	+		RR42_RS33710	0.47	+0.3
2,990,371	-		RR42_RS33710	0.47	-0.7
2,990,371	-		RR42_RS33710	0.47	+0.2
2,990,504	-		RR42_RS33710	0.65	-0.4
2,990,504	-		RR42_RS33710	0.65	-0.1
2,990,504	-		RR42_RS33710	0.65	+1.2
2,990,719	-				+0.5
2,990,719	-				-0.1
2,990,802	+				-1.9
2,990,859	+				+0.7
2,990,860	-				-1.4
2,990,938	+				-0.2
2,990,939	-				+1.9
2,990,950	+				+0.3
2,990,951	-				+0.5
2,990,982	+		RR42_RS33715	0.10	-0.3
2,991,054	+		RR42_RS33715	0.16	-0.3
2,991,087	+		RR42_RS33715	0.18	+0.1
2,991,219	+		RR42_RS33715	0.28	-1.1
2,991,279	+		RR42_RS33715	0.33	+0.1
2,991,279	+		RR42_RS33715	0.33	+0.3
2,991,279	+		RR42_RS33715	0.33	-0.5
2,991,280	-		RR42_RS33715	0.33	+0.5
2,991,280	-		RR42_RS33715	0.33	-0.7
2,991,280	-		RR42_RS33715	0.33	-1.9
2,991,280	-		RR42_RS33715	0.33	-1.7
2,991,280	-		RR42_RS33715	0.33	-0.2
2,991,289	-		RR42_RS33715	0.33	-3.5
2,991,666	+		RR42_RS33715	0.62	-1.5
2,991,666	+		RR42_RS33715	0.62	+1.1
2,991,667	-		RR42_RS33715	0.62	-0.6
2,991,753	+		RR42_RS33715	0.68	+0.4
2,991,753	+		RR42_RS33715	0.68	+0.6
2,991,754	-		RR42_RS33715	0.68	+0.1
2,992,316	+		RR42_RS33720	0.12	-0.7
2,992,379	+		RR42_RS33720	0.19	-0.4
2,992,454	+		RR42_RS33720	0.28	-1.7
2,992,454	+		RR42_RS33720	0.28	-3.2
2,992,506	-		RR42_RS33720	0.34	-0.6
2,992,506	-		RR42_RS33720	0.34	-1.0
2,992,550	+		RR42_RS33720	0.39	+0.6
2,992,551	-		RR42_RS33720	0.39	-1.8
2,992,655	+		RR42_RS33720	0.52	+0.5
2,992,655	+		RR42_RS33720	0.52	-0.1
2,992,657	+		RR42_RS33720	0.52	+1.1
2,992,942	+		RR42_RS33720	0.86	+0.5
2,992,943	-		RR42_RS33720	0.86	-1.0