Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33620

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,968,430	+				-0.4
2,968,430	+				+1.5
2,968,430	+				-0.9
2,968,460	+				+0.4
2,968,482	+				-1.5
2,968,483	-				+1.2
2,968,486	-				+2.5
2,968,758	+		RR42_RS33615	0.43	-1.4
2,968,758	+		RR42_RS33615	0.43	-0.1
2,968,798	-		RR42_RS33615	0.49	-1.1
2,968,965	+		RR42_RS33615	0.73	-0.6
2,968,965	+		RR42_RS33615	0.73	-0.8
2,968,965	+		RR42_RS33615	0.73	+0.4
2,968,965	+		RR42_RS33615	0.73	+0.8
2,968,965	+		RR42_RS33615	0.73	-1.4
2,968,965	+		RR42_RS33615	0.73	+0.4
2,968,965	+		RR42_RS33615	0.73	-0.1
2,968,966	-		RR42_RS33615	0.73	-0.4
2,968,966	-		RR42_RS33615	0.73	-0.3
2,968,966	-		RR42_RS33615	0.73	+1.6
2,968,966	-		RR42_RS33615	0.73	+1.3
2,969,024	+		RR42_RS33615	0.81	+0.9
2,969,059	-		RR42_RS33615	0.86	-0.9
2,969,059	-		RR42_RS33615	0.86	+0.6
2,969,134	-				-0.3
2,969,210	+				-1.0
2,969,210	+				-2.2
2,969,211	-				-3.1
2,969,211	-				-1.0
2,969,378	+		RR42_RS33620	0.26	+0.5
2,969,378	+		RR42_RS33620	0.26	+0.2
2,969,488	-		RR42_RS33620	0.39	-2.1
2,969,702	-		RR42_RS33620	0.63	+0.9
2,970,172	+				-3.1
2,970,202	-				+0.2
2,970,214	+				-0.5
2,970,247	+		RR42_RS33625	0.11	-0.9
2,970,265	+		RR42_RS33625	0.13	+0.5
2,970,332	+		RR42_RS33625	0.21	-0.1
2,970,541	+		RR42_RS33625	0.46	-0.9
2,970,577	+		RR42_RS33625	0.50	-0.9
2,970,578	-		RR42_RS33625	0.50	-0.0
2,970,578	-		RR42_RS33625	0.50	+0.6
2,970,587	-		RR42_RS33625	0.52	-0.3
2,970,607	+		RR42_RS33625	0.54	+1.3
2,970,607	+		RR42_RS33625	0.54	+1.1
2,970,608	+		RR42_RS33625	0.54	-0.1
2,970,608	-		RR42_RS33625	0.54	+2.3
2,970,608	-		RR42_RS33625	0.54	-0.5
2,970,694	+		RR42_RS33625	0.64	-2.0
2,970,694	+		RR42_RS33625	0.64	+0.0
2,970,694	+		RR42_RS33625	0.64	-1.4
2,970,694	+		RR42_RS33625	0.64	+1.7
2,970,695	-		RR42_RS33625	0.64	-1.1
2,970,695	-		RR42_RS33625	0.64	-0.3
2,970,695	-		RR42_RS33625	0.64	+0.9
2,970,716	-		RR42_RS33625	0.67	-1.4
2,970,716	-		RR42_RS33625	0.67	+0.3
2,970,736	-		RR42_RS33625	0.69	-1.4
2,970,796	+		RR42_RS33625	0.76	+0.2
2,970,866	-		RR42_RS33625	0.85	-2.1
2,970,866	-		RR42_RS33625	0.85	+0.9
2,970,908	-		RR42_RS33625	0.90	-2.1
2,970,952	+				-0.9
2,970,952	+				+0.6
2,970,952	+				+0.6
2,970,953	-				-1.1