Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33610

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,966,741	+		RR42_RS33605	0.24	+1.0
2,966,741	+		RR42_RS33605	0.24	-0.8
2,966,862	+		RR42_RS33605	0.33	-2.7
2,966,862	+		RR42_RS33605	0.33	-1.2
2,966,862	+		RR42_RS33605	0.33	+0.9
2,966,862	+		RR42_RS33605	0.33	+0.5
2,966,862	+		RR42_RS33605	0.33	-0.7
2,966,862	+		RR42_RS33605	0.33	-0.1
2,966,863	-		RR42_RS33605	0.33	+0.0
2,966,865	+		RR42_RS33605	0.33	-1.4
2,966,866	-		RR42_RS33605	0.33	-0.9
2,966,910	+		RR42_RS33605	0.37	+0.8
2,966,910	+		RR42_RS33605	0.37	-0.4
2,966,910	+		RR42_RS33605	0.37	+3.0
2,966,911	-		RR42_RS33605	0.37	+0.1
2,966,949	+		RR42_RS33605	0.40	+0.9
2,966,949	+		RR42_RS33605	0.40	+0.9
2,966,950	-		RR42_RS33605	0.40	-1.7
2,966,950	-		RR42_RS33605	0.40	+1.3
2,967,345	+		RR42_RS33605	0.71	-0.2
2,967,346	-		RR42_RS33605	0.71	+0.9
2,967,400	-		RR42_RS33605	0.75	-0.4
2,967,400	-		RR42_RS33605	0.75	+0.4
2,967,400	-		RR42_RS33605	0.75	-0.1
2,967,538	-		RR42_RS33605	0.86	-0.8
2,967,724	+				+0.4
2,967,724	+				-1.8
2,967,725	-				-0.3
2,967,725	-				+2.2
2,968,086	-		RR42_RS33610	0.49	+1.4
2,968,086	-		RR42_RS33610	0.49	+0.4
2,968,086	-		RR42_RS33610	0.49	+0.6
2,968,430	+				-0.4
2,968,430	+				+1.5
2,968,430	+				-0.9
2,968,460	+				+0.4
2,968,482	+				-1.5
2,968,483	-				+1.2
2,968,486	-				+2.5
2,968,758	+		RR42_RS33615	0.43	-1.4
2,968,758	+		RR42_RS33615	0.43	-0.1
2,968,798	-		RR42_RS33615	0.49	-1.1
2,968,965	+		RR42_RS33615	0.73	-0.6
2,968,965	+		RR42_RS33615	0.73	-0.8
2,968,965	+		RR42_RS33615	0.73	+0.4
2,968,965	+		RR42_RS33615	0.73	+0.8
2,968,965	+		RR42_RS33615	0.73	-1.4
2,968,965	+		RR42_RS33615	0.73	+0.4
2,968,965	+		RR42_RS33615	0.73	-0.1
2,968,966	-		RR42_RS33615	0.73	-0.4
2,968,966	-		RR42_RS33615	0.73	-0.3
2,968,966	-		RR42_RS33615	0.73	+1.6
2,968,966	-		RR42_RS33615	0.73	+1.3
2,969,024	+		RR42_RS33615	0.81	+0.9
2,969,059	-		RR42_RS33615	0.86	-0.9
2,969,059	-		RR42_RS33615	0.86	+0.6
2,969,134	-				-0.3
2,969,210	+				-1.0
2,969,210	+				-2.2
2,969,211	-				-3.1
2,969,211	-				-1.0
2,969,378	+		RR42_RS33620	0.26	+0.5
2,969,378	+		RR42_RS33620	0.26	+0.2