Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33375

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,901,142	+		RR42_RS33370	0.14	+0.3
2,901,142	+		RR42_RS33370	0.14	-0.7
2,901,143	-		RR42_RS33370	0.14	-1.9
2,901,143	-		RR42_RS33370	0.14	+0.6
2,901,146	+		RR42_RS33370	0.14	-1.5
2,901,146	+		RR42_RS33370	0.14	+1.7
2,901,146	+		RR42_RS33370	0.14	-1.9
2,901,146	+		RR42_RS33370	0.14	-1.6
2,901,147	-		RR42_RS33370	0.14	-1.2
2,901,189	-		RR42_RS33370	0.20	+0.8
2,901,299	+		RR42_RS33370	0.33	-1.1
2,901,299	+		RR42_RS33370	0.33	-3.2
2,901,299	+		RR42_RS33370	0.33	+0.9
2,901,299	+		RR42_RS33370	0.33	-2.4
2,901,300	-		RR42_RS33370	0.33	-0.5
2,901,300	-		RR42_RS33370	0.33	+0.9
2,901,300	-		RR42_RS33370	0.33	-1.0
2,901,300	-		RR42_RS33370	0.33	+0.2
2,901,352	+		RR42_RS33370	0.40	-1.1
2,901,515	+		RR42_RS33370	0.60	-2.9
2,901,515	+		RR42_RS33370	0.60	-1.8
2,901,515	+		RR42_RS33370	0.60	+0.9
2,901,516	-		RR42_RS33370	0.60	+0.3
2,901,516	-		RR42_RS33370	0.60	+0.8
2,901,522	-		RR42_RS33370	0.60	+0.1
2,901,794	+				-1.4
2,901,794	+				+1.0
2,901,795	-				-0.4
2,901,899	+				+0.6
2,901,899	+				-2.2
2,901,930	+				+0.2
2,901,930	+				+0.6
2,901,931	-				-0.1
2,901,931	-				-0.7
2,901,931	-				-2.8
2,901,984	-		RR42_RS33375	0.11	-1.1
2,902,064	+		RR42_RS33375	0.31	-1.2
2,902,266	+		RR42_RS33375	0.81	+1.5
2,902,291	+		RR42_RS33375	0.87	+0.2
2,902,292	-		RR42_RS33375	0.87	-0.5
2,902,447	+				+0.7
2,902,447	+				+1.1
2,902,447	+				+0.6
2,902,665	+		RR42_RS33380	0.27	-0.8
2,902,666	-		RR42_RS33380	0.27	-0.8
2,902,666	-		RR42_RS33380	0.27	-0.3
2,902,817	+		RR42_RS33380	0.41	+0.2
2,902,818	-		RR42_RS33380	0.41	+0.5
2,902,818	-		RR42_RS33380	0.41	-0.0
2,902,819	+		RR42_RS33380	0.41	+0.8
2,902,819	+		RR42_RS33380	0.41	-2.0
2,902,819	+		RR42_RS33380	0.41	+2.2
2,902,819	+		RR42_RS33380	0.41	+0.5
2,902,820	-		RR42_RS33380	0.41	+0.5
2,902,916	-		RR42_RS33380	0.50	-1.7
2,902,916	-		RR42_RS33380	0.50	-2.6
2,902,939	+		RR42_RS33380	0.52	-0.7
2,902,939	+		RR42_RS33380	0.52	-0.9
2,902,939	+		RR42_RS33380	0.52	-0.8
2,902,939	+		RR42_RS33380	0.52	-3.7
2,902,939	+		RR42_RS33380	0.52	+0.7
2,902,939	+		RR42_RS33380	0.52	-0.8
2,902,939	+		RR42_RS33380	0.52	-2.2
2,902,939	+		RR42_RS33380	0.52	-0.2
2,902,940	-		RR42_RS33380	0.52	+0.6
2,902,940	-		RR42_RS33380	0.52	+1.3
2,902,962	+		RR42_RS33380	0.54	+0.2
2,902,963	-		RR42_RS33380	0.54	-0.3
2,902,963	-		RR42_RS33380	0.54	-0.9
2,902,970	-		RR42_RS33380	0.55	+1.7
2,903,074	+		RR42_RS33380	0.65	+0.9
2,903,075	-		RR42_RS33380	0.65	-1.3
2,903,075	-		RR42_RS33380	0.65	-0.0
2,903,075	-		RR42_RS33380	0.65	-1.4
2,903,139	-		RR42_RS33380	0.71	+0.3
2,903,300	+		RR42_RS33380	0.86	-2.8
2,903,300	+		RR42_RS33380	0.86	+0.2
2,903,300	+		RR42_RS33380	0.86	+0.4
2,903,300	+		RR42_RS33380	0.86	+0.8
2,903,301	-		RR42_RS33380	0.86	-0.6