Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33015

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,810,947	-		RR42_RS33010	0.45	-0.4
2,811,089	-		RR42_RS33010	0.57	-1.8
2,811,098	+		RR42_RS33010	0.57	+0.9
2,811,099	-		RR42_RS33010	0.57	-1.3
2,811,099	-		RR42_RS33010	0.57	-2.7
2,811,099	-		RR42_RS33010	0.57	+1.6
2,811,164	-		RR42_RS33010	0.63	-1.0
2,811,252	+		RR42_RS33010	0.70	+1.5
2,811,253	+		RR42_RS33010	0.70	-2.3
2,811,352	-		RR42_RS33010	0.78	-0.4
2,811,352	-		RR42_RS33010	0.78	-0.6
2,811,354	-		RR42_RS33010	0.78	-0.4
2,811,411	+		RR42_RS33010	0.82	-1.5
2,811,425	-		RR42_RS33010	0.83	-2.0
2,811,440	-		RR42_RS33010	0.85	+0.5
2,811,483	+		RR42_RS33010	0.88	-1.2
2,811,696	+				+0.9
2,812,250	+		RR42_RS33015	0.55	-0.5
2,812,332	+		RR42_RS33015	0.63	+0.2
2,812,383	+		RR42_RS33015	0.69	+0.7
2,812,383	+		RR42_RS33015	0.69	+2.2
2,812,384	-		RR42_RS33015	0.69	+1.1
2,812,384	-		RR42_RS33015	0.69	-0.2
2,812,441	-		RR42_RS33015	0.75	+1.2
2,812,461	-		RR42_RS33015	0.77	-1.9
2,812,476	+		RR42_RS33015	0.78	+0.1
2,812,998	+		RR42_RS33020	0.21	+1.3
2,812,998	+		RR42_RS33020	0.21	+0.3
2,813,370	+		RR42_RS33020	0.59	-2.3
2,813,410	+		RR42_RS33020	0.63	+0.9
2,813,411	-		RR42_RS33020	0.63	-0.4
2,813,461	+		RR42_RS33020	0.69	+0.7
2,813,461	+		RR42_RS33020	0.69	-0.7
2,813,462	-		RR42_RS33020	0.69	+0.2
2,813,496	+		RR42_RS33020	0.72	-1.4
2,813,496	+		RR42_RS33020	0.72	+0.2
2,813,496	+		RR42_RS33020	0.72	+0.2
2,813,496	+		RR42_RS33020	0.72	-1.3
2,813,526	-		RR42_RS33020	0.75	-0.3
2,813,567	-		RR42_RS33020	0.79	-0.6