Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32915

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,783,623	-		RR42_RS32910	0.18	+0.9
2,783,805	+		RR42_RS32910	0.38	+0.5
2,783,844	+		RR42_RS32910	0.43	-1.5
2,783,847	+		RR42_RS32910	0.43	+0.5
2,783,848	-		RR42_RS32910	0.43	-0.9
2,783,848	-		RR42_RS32910	0.43	+1.4
2,784,030	+		RR42_RS32910	0.63	-0.8
2,784,031	-		RR42_RS32910	0.63	+0.6
2,784,031	-		RR42_RS32910	0.63	+1.8
2,784,031	-		RR42_RS32910	0.63	-0.6
2,784,031	-		RR42_RS32910	0.63	-0.1
2,784,036	+		RR42_RS32910	0.64	+0.1
2,784,037	-		RR42_RS32910	0.64	+1.4
2,784,180	+		RR42_RS32910	0.79	+0.3
2,784,180	+		RR42_RS32910	0.79	-0.3
2,784,181	-		RR42_RS32910	0.79	+0.2
2,784,181	-		RR42_RS32910	0.79	+0.1
2,784,189	+		RR42_RS32910	0.80	+0.9
2,784,189	+		RR42_RS32910	0.80	+2.2
2,784,394	-				-3.3
2,784,463	+				-0.6
2,784,613	+		RR42_RS32915	0.24	+0.1
2,784,614	-		RR42_RS32915	0.24	-0.6
2,784,614	-		RR42_RS32915	0.24	-0.2
2,784,614	-		RR42_RS32915	0.24	-1.7
2,784,866	-		RR42_RS32915	0.52	+0.1
2,784,866	-		RR42_RS32915	0.52	+1.0
2,785,022	+		RR42_RS32915	0.70	-0.7
2,785,023	-		RR42_RS32915	0.70	-1.6
2,785,024	+		RR42_RS32915	0.70	-0.7
2,785,024	+		RR42_RS32915	0.70	+1.7
2,785,024	+		RR42_RS32915	0.70	+0.1
2,785,024	+		RR42_RS32915	0.70	+0.9
2,785,024	+		RR42_RS32915	0.70	-1.2
2,785,025	-		RR42_RS32915	0.71	-0.5
2,785,025	-		RR42_RS32915	0.71	+0.3
2,785,025	-		RR42_RS32915	0.71	-0.7
2,785,025	-		RR42_RS32915	0.71	+0.3
2,785,025	-		RR42_RS32915	0.71	+0.1
2,785,025	-		RR42_RS32915	0.71	+0.9
2,785,517	+		RR42_RS32920	0.17	-0.6
2,785,601	+		RR42_RS32920	0.25	+0.9
2,785,602	-		RR42_RS32920	0.25	-3.9
2,785,671	+		RR42_RS32920	0.31	+0.6
2,785,672	-		RR42_RS32920	0.31	-0.8
2,785,740	-		RR42_RS32920	0.38	+0.9
2,785,740	-		RR42_RS32920	0.38	-0.1
2,785,862	+		RR42_RS32920	0.49	+0.4
2,785,862	+		RR42_RS32920	0.49	+1.2
2,785,862	+		RR42_RS32920	0.49	-0.7
2,785,863	-		RR42_RS32920	0.49	-1.1
2,785,950	-		RR42_RS32920	0.57	-0.9
2,785,959	+		RR42_RS32920	0.58	+1.2
2,786,018	+		RR42_RS32920	0.64	-0.2
2,786,019	-		RR42_RS32920	0.64	+0.9
2,786,045	+		RR42_RS32920	0.66	-1.4
2,786,046	-		RR42_RS32920	0.66	+0.5
2,786,046	-		RR42_RS32920	0.66	+1.9
2,786,216	+		RR42_RS32920	0.82	-1.0
2,786,217	-		RR42_RS32920	0.82	-1.0
2,786,217	-		RR42_RS32920	0.82	-2.7
2,786,217	-		RR42_RS32920	0.82	+0.2