Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32885

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,776,269	+				-1.5
2,776,287	+				-0.1
2,776,350	+				-1.5
2,776,459	-		RR42_RS32880	0.19	+1.0
2,776,704	+		RR42_RS32880	0.47	+0.0
2,776,705	-		RR42_RS32880	0.47	+0.4
2,776,705	-		RR42_RS32880	0.47	+0.9
2,776,791	+		RR42_RS32880	0.57	-1.0
2,776,792	-		RR42_RS32880	0.57	-1.0
2,776,792	-		RR42_RS32880	0.57	-1.3
2,776,839	+		RR42_RS32880	0.62	+1.0
2,776,839	+		RR42_RS32880	0.62	-1.1
2,776,860	+		RR42_RS32880	0.65	+0.4
2,776,860	+		RR42_RS32880	0.65	+0.4
2,776,861	-		RR42_RS32880	0.65	-2.3
2,777,305	+				-0.4
2,777,419	+		RR42_RS32885	0.19	-1.1
2,777,419	+		RR42_RS32885	0.19	-1.9
2,777,419	+		RR42_RS32885	0.19	-0.3
2,777,629	+		RR42_RS32885	0.40	-0.8
2,777,806	+		RR42_RS32885	0.59	-0.9
2,777,806	+		RR42_RS32885	0.59	+1.0
2,777,920	+		RR42_RS32885	0.71	-0.5
2,777,921	-		RR42_RS32885	0.71	-0.0
2,778,019	+		RR42_RS32885	0.81	-0.8
2,778,019	+		RR42_RS32885	0.81	+0.0
2,778,019	+		RR42_RS32885	0.81	-0.6
2,778,019	+		RR42_RS32885	0.81	-0.1
2,778,019	+		RR42_RS32885	0.81	-0.1
2,778,192	-				+1.2
2,778,192	-				-2.7
2,778,196	-				-0.1
2,778,196	-				-0.6
2,778,196	-				+0.1
2,778,351	+				-2.5
2,778,705	-		RR42_RS32890	0.40	+0.4
2,778,719	+		RR42_RS32890	0.42	-0.1
2,778,720	-		RR42_RS32890	0.42	-2.7
2,778,720	-		RR42_RS32890	0.42	+0.5
2,778,720	-		RR42_RS32890	0.42	-2.3
2,778,800	+		RR42_RS32890	0.50	+0.4
2,778,994	+		RR42_RS32890	0.70	+0.8