Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32720

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,734,159	+				+0.4
2,734,216	+				-2.2
2,734,217	-				-1.0
2,734,489	+		RR42_RS32715	0.51	+1.8
2,734,490	-		RR42_RS32715	0.51	+0.0
2,734,658	+		RR42_RS32715	0.76	-0.7
2,734,659	-		RR42_RS32715	0.77	+1.8
2,734,660	+		RR42_RS32715	0.77	+0.3
2,734,660	+		RR42_RS32715	0.77	+0.7
2,734,661	-		RR42_RS32715	0.77	-1.3
2,734,661	-		RR42_RS32715	0.77	+0.0
2,734,661	-		RR42_RS32715	0.77	+1.1
2,734,661	-		RR42_RS32715	0.77	-3.4
2,734,811	+				+1.4
2,734,812	-				+0.5
2,734,812	-				+0.6
2,734,812	-				-2.5
2,734,914	+				+1.5
2,734,914	+				-0.3
2,734,914	+				-1.6
2,734,914	+				-0.2
2,734,914	+				-1.5
2,734,942	+				-0.2
2,734,942	+				-0.2
2,735,106	+				-0.0
2,735,106	+				-0.7
2,735,106	+				-0.1
2,735,106	+				-1.5
2,735,106	+				-1.4
2,735,107	-				-0.2
2,735,107	-				+0.8
2,735,107	-				+0.2
2,735,112	-				-0.7
2,735,112	-				-0.4
2,735,222	+		RR42_RS32720	0.17	-1.1
2,735,222	+		RR42_RS32720	0.17	-3.9
2,735,223	-		RR42_RS32720	0.18	-1.3
2,735,223	-		RR42_RS32720	0.18	+0.8
2,735,288	+		RR42_RS32720	0.35	-3.7
2,735,288	+		RR42_RS32720	0.35	-2.3
2,735,288	+		RR42_RS32720	0.35	-0.4
2,735,334	+		RR42_RS32720	0.47	-0.6
2,736,003	+		RR42_RS32725	0.44	+0.4
2,736,004	-		RR42_RS32725	0.44	+0.0
2,736,090	+		RR42_RS32725	0.53	-0.9
2,736,090	+		RR42_RS32725	0.53	-1.7
2,736,090	+		RR42_RS32725	0.53	-0.7
2,736,090	+		RR42_RS32725	0.53	+0.6
2,736,090	+		RR42_RS32725	0.53	-0.6
2,736,091	-		RR42_RS32725	0.53	+0.6
2,736,091	-		RR42_RS32725	0.53	+0.8
2,736,091	-		RR42_RS32725	0.53	+0.2
2,736,091	-		RR42_RS32725	0.53	+1.2
2,736,091	-		RR42_RS32725	0.53	+0.9
2,736,228	+		RR42_RS32725	0.67	-2.6
2,736,228	+		RR42_RS32725	0.67	-1.2
2,736,229	-		RR42_RS32725	0.67	+0.3
2,736,229	-		RR42_RS32725	0.67	+1.1
2,736,229	-		RR42_RS32725	0.67	+0.0
2,736,229	-		RR42_RS32725	0.67	+0.4
2,736,441	+		RR42_RS32725	0.89	-0.4
2,736,441	+		RR42_RS32725	0.89	-0.4
2,736,442	-		RR42_RS32725	0.89	+0.3