Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31330

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,403,442	+				+0.7
2,403,442	+				+0.6
2,403,443	-				-2.0
2,403,505	+				+0.9
2,403,506	-				+0.9
2,403,525	+				-0.6
2,403,564	+				+0.5
2,403,712	-				-1.5
2,403,849	+				+0.8
2,403,850	-				-0.6
2,403,944	-				+0.6
2,403,944	-				-0.4
2,403,944	-				-0.2
2,403,944	-				+1.8
2,403,944	-				+1.0
2,403,944	-				+0.8
2,404,216	+		RR42_RS31325	0.66	-1.5
2,404,332	-				+0.9
2,404,333	+				-2.4
2,404,334	-				-0.4
2,404,436	+				+1.0
2,404,870	-		RR42_RS31330	0.48	-1.5
2,405,335	+				+0.2
2,405,356	+				-2.2
2,405,356	+				-2.1
2,405,356	-				-0.6
2,405,357	-				+0.1
2,405,417	+				-2.1
2,405,503	-				-1.8
2,405,503	-				-1.3
2,405,525	+				-0.3
2,405,626	+		RR42_RS31335	0.12	+1.0
2,405,707	-		RR42_RS31335	0.18	-0.9
2,405,749	+		RR42_RS31335	0.21	-0.9
2,405,750	-		RR42_RS31335	0.21	-0.7
2,405,887	+		RR42_RS31335	0.31	+0.6
2,405,887	+		RR42_RS31335	0.31	-2.9
2,405,888	-		RR42_RS31335	0.31	-0.1
2,406,111	+		RR42_RS31335	0.48	-0.5
2,406,111	+		RR42_RS31335	0.48	+0.9
2,406,111	+		RR42_RS31335	0.48	-1.6
2,406,111	+		RR42_RS31335	0.48	-1.8
2,406,111	+		RR42_RS31335	0.48	+1.0
2,406,112	-		RR42_RS31335	0.48	+0.1
2,406,112	-		RR42_RS31335	0.48	+0.1
2,406,112	-		RR42_RS31335	0.48	-0.5
2,406,316	+		RR42_RS31335	0.63	+2.5