Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31305

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,395,537	+		RR42_RS31300	0.48	+0.2
2,395,537	+		RR42_RS31300	0.48	+0.7
2,395,538	-				-1.3
2,395,606	+		RR42_RS31300	0.55	-1.4
2,395,682	-		RR42_RS31300	0.64	+0.4
2,396,168	+				+0.7
2,396,169	-				+0.7
2,396,169	-				+0.3
2,396,338	+		RR42_RS31305	0.16	-0.5
2,396,522	+		RR42_RS31305	0.34	+1.2
2,396,523	-		RR42_RS31305	0.34	-0.0
2,396,536	+		RR42_RS31305	0.35	+1.9
2,396,536	+		RR42_RS31305	0.35	+0.1
2,396,536	+		RR42_RS31305	0.35	+0.4
2,396,537	-		RR42_RS31305	0.35	-2.3
2,396,537	-		RR42_RS31305	0.35	+1.8
2,396,537	-		RR42_RS31305	0.35	-0.9
2,396,804	+		RR42_RS31305	0.62	+1.3
2,396,804	+		RR42_RS31305	0.62	+0.2
2,396,805	-		RR42_RS31305	0.62	-0.3
2,396,808	-		RR42_RS31305	0.62	-0.9
2,396,859	-		RR42_RS31305	0.67	-1.3
2,396,859	-		RR42_RS31305	0.67	-0.8
2,396,929	+		RR42_RS31305	0.74	+2.1
2,396,929	+		RR42_RS31305	0.74	-2.1
2,396,929	+		RR42_RS31305	0.74	-1.3
2,396,930	-		RR42_RS31305	0.74	-0.6
2,396,930	-		RR42_RS31305	0.74	-1.6
2,397,169	+				-0.9
2,397,259	-				+0.2
2,397,259	-				-0.9
2,397,425	+				-1.5
2,397,425	+				-0.0
2,397,426	-				+0.7
2,397,494	+				-0.3
2,397,495	-				+0.7
2,397,559	+				+0.5
2,397,559	+				-0.4
2,397,560	-				-2.3
2,397,560	-				-0.4
2,397,828	+		RR42_RS31310	0.18	-1.1
2,397,829	-		RR42_RS31310	0.18	+2.7
2,397,872	+		RR42_RS31310	0.19	-1.8
2,397,873	-		RR42_RS31310	0.19	-1.2
2,397,910	-		RR42_RS31310	0.21	+1.9
2,397,971	+		RR42_RS31310	0.23	-1.8
2,397,972	-		RR42_RS31310	0.23	+0.4
2,397,972	-		RR42_RS31310	0.23	+1.9
2,398,089	+		RR42_RS31310	0.27	+2.3
2,398,090	-		RR42_RS31310	0.27	-0.8
2,398,145	+		RR42_RS31310	0.29	-0.5
2,398,168	-		RR42_RS31310	0.30	+0.8
2,398,168	-		RR42_RS31310	0.30	+0.7
2,398,168	-		RR42_RS31310	0.30	-0.3