Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31280

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,391,928	+		RR42_RS31275	0.35	+1.2
2,391,929	-		RR42_RS31275	0.35	+0.5
2,391,954	+		RR42_RS31275	0.37	+1.5
2,391,963	+		RR42_RS31275	0.37	+0.8
2,391,964	-		RR42_RS31275	0.37	-1.1
2,392,071	+		RR42_RS31275	0.45	+0.0
2,392,071	+		RR42_RS31275	0.45	+1.8
2,392,072	-		RR42_RS31275	0.45	-0.4
2,392,072	-		RR42_RS31275	0.45	+0.1
2,392,072	-		RR42_RS31275	0.45	+1.4
2,392,161	+		RR42_RS31275	0.52	-0.6
2,392,161	+		RR42_RS31275	0.52	+0.7
2,392,162	-		RR42_RS31275	0.52	+0.7
2,392,174	+		RR42_RS31275	0.53	+0.7
2,392,175	-		RR42_RS31275	0.53	+1.3
2,392,175	-		RR42_RS31275	0.53	-1.6
2,392,175	-		RR42_RS31275	0.53	-0.9
2,392,176	+		RR42_RS31275	0.53	+1.5
2,392,369	-		RR42_RS31275	0.67	+0.5
2,392,489	+		RR42_RS31275	0.76	-1.0
2,392,647	+		RR42_RS31275	0.88	+0.6
2,392,647	+		RR42_RS31275	0.88	-2.3
2,392,648	-		RR42_RS31275	0.88	+0.5
2,392,657	-		RR42_RS31275	0.89	+0.4
2,392,744	-				+0.2
2,392,828	+				+1.4
2,392,828	+				+0.4
2,392,829	-				+1.3
2,392,829	-				-0.4
2,392,829	-				+0.5
2,393,008	+		RR42_RS31280	0.79	+1.9
2,393,008	+		RR42_RS31280	0.79	+2.7
2,393,008	+		RR42_RS31280	0.79	+0.3
2,393,009	-		RR42_RS31280	0.80	+0.4
2,393,009	-		RR42_RS31280	0.80	-0.1
2,393,009	-		RR42_RS31280	0.80	+0.5
2,393,043	-				-0.8
2,393,179	+				+1.3
2,393,209	+				+1.0
2,393,210	-				+0.1
2,393,219	+				-0.7
2,393,253	+				+0.1
2,393,253	+				-2.8
2,393,253	+				-1.3
2,393,253	+				+0.2
2,393,254	-				+0.4
2,393,254	-				+0.8
2,393,261	+				+0.8
2,393,261	+				-1.6
2,393,262	-				+0.5
2,393,262	-				+1.1
2,393,262	-				+0.5
2,393,262	-				+0.0
2,393,262	-				+0.1
2,393,262	-				-4.4
2,393,262	-				-0.6
2,393,262	-				+0.0
2,393,656	-		RR42_RS31285	0.31	+1.3
2,393,730	-				+1.4
2,393,730	-				+0.7
2,393,852	-		RR42_RS31290	0.51	+1.3
2,393,852	-		RR42_RS31290	0.51	+1.1
2,393,966	+				+2.6
2,393,967	-				+0.6
2,394,028	+				+1.8
2,394,028	+				+0.9
2,394,029	-				+0.2
2,394,049	+				+2.0
2,394,049	+				+1.9
2,394,050	-				-0.0
2,394,050	-				-0.3
2,394,050	-				-0.8
2,394,053	+				+2.1
2,394,054	-				+0.3