Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31265

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,388,016	-				-0.3
2,388,109	+		RR42_RS31260	0.18	+0.6
2,388,109	+		RR42_RS31260	0.18	-0.2
2,388,110	-		RR42_RS31260	0.18	-1.6
2,388,110	-		RR42_RS31260	0.18	+0.4
2,388,110	-		RR42_RS31260	0.18	+0.8
2,388,110	-		RR42_RS31260	0.18	+0.1
2,388,358	+		RR42_RS31260	0.50	-1.6
2,388,359	-		RR42_RS31260	0.50	-2.1
2,388,533	-		RR42_RS31260	0.72	-1.9
2,388,583	+		RR42_RS31260	0.79	-0.6
2,388,584	-		RR42_RS31260	0.79	-0.3
2,388,974	+		RR42_RS31265	0.32	+0.1
2,388,974	+		RR42_RS31265	0.32	-1.0
2,388,974	+		RR42_RS31265	0.32	-0.9
2,388,975	-		RR42_RS31265	0.32	+0.4
2,388,998	+		RR42_RS31265	0.35	+0.6
2,388,998	+		RR42_RS31265	0.35	-1.6
2,388,999	-		RR42_RS31265	0.35	-1.6
2,389,127	+		RR42_RS31265	0.53	+0.3
2,389,147	-		RR42_RS31265	0.56	+1.7
2,389,286	+		RR42_RS31265	0.75	-1.8
2,389,286	+		RR42_RS31265	0.75	-0.3
2,389,286	+		RR42_RS31265	0.75	+1.5
2,389,287	-		RR42_RS31265	0.75	-0.7
2,389,427	-				-3.2
2,389,427	-				+0.3
2,389,427	-				+1.3
2,389,487	+				-2.6
2,389,488	-				+1.1
2,389,488	-				-1.9
2,389,750	-				+1.8
2,389,762	-				+0.0
2,389,830	+				+0.3
2,389,830	+				+0.2
2,389,831	-				-1.5
2,389,831	-				-0.6
2,389,831	-				-0.1
2,389,831	-				-0.2
2,389,920	+				-0.1
2,389,921	-				-2.6
2,389,972	-				-0.9
2,390,037	-				+0.3
2,390,094	+				-0.2
2,390,376	+		RR42_RS31270	0.22	+1.6
2,390,376	+		RR42_RS31270	0.22	+2.5
2,390,376	+		RR42_RS31270	0.22	+1.4
2,390,376	+		RR42_RS31270	0.22	+2.3
2,390,377	-		RR42_RS31270	0.22	+1.0
2,390,377	-		RR42_RS31270	0.22	-0.3
2,390,461	-		RR42_RS31270	0.29	+2.4
2,390,461	-		RR42_RS31270	0.29	+2.1
2,390,461	-		RR42_RS31270	0.29	+0.9
2,390,461	-		RR42_RS31270	0.29	+1.3