Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31230

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,382,940	+		RR42_RS31225	0.16	-0.6
2,382,941	-		RR42_RS31225	0.16	-0.1
2,382,941	-		RR42_RS31225	0.16	-1.1
2,382,941	-		RR42_RS31225	0.16	-0.5
2,382,941	-		RR42_RS31225	0.16	-0.7
2,382,986	-		RR42_RS31225	0.26	-1.3
2,382,986	-		RR42_RS31225	0.26	-0.3
2,382,986	-		RR42_RS31225	0.26	-3.9
2,383,030	+		RR42_RS31225	0.36	-2.5
2,383,093	+		RR42_RS31225	0.50	+0.4
2,383,094	-		RR42_RS31225	0.50	-0.1
2,383,098	-		RR42_RS31225	0.51	+0.3
2,383,098	-		RR42_RS31225	0.51	-2.7
2,383,111	+		RR42_RS31225	0.54	+0.6
2,383,111	+		RR42_RS31225	0.54	-0.9
2,383,111	+		RR42_RS31225	0.54	+0.5
2,383,112	-		RR42_RS31225	0.54	-0.5
2,383,112	-		RR42_RS31225	0.54	-0.4
2,383,112	-		RR42_RS31225	0.54	+0.3
2,383,112	-		RR42_RS31225	0.54	+1.7
2,383,112	-		RR42_RS31225	0.54	-0.4
2,383,144	+		RR42_RS31225	0.61	+1.1
2,383,174	+		RR42_RS31225	0.68	-0.4
2,383,174	+		RR42_RS31225	0.68	-0.2
2,383,225	+		RR42_RS31225	0.79	-0.9
2,383,225	+		RR42_RS31225	0.79	-0.2
2,383,226	-		RR42_RS31225	0.79	-0.4
2,383,319	+				-3.1
2,383,320	-				+1.7
2,383,320	-				+0.2
2,383,421	+				-0.2
2,383,631	+		RR42_RS31230	0.23	-2.2
2,384,015	+		RR42_RS31230	0.63	+0.8
2,384,021	+		RR42_RS31230	0.64	-0.2
2,384,050	+		RR42_RS31230	0.67	-0.1
2,384,050	+		RR42_RS31230	0.67	-1.3
2,384,051	-		RR42_RS31230	0.67	+0.3
2,384,156	+		RR42_RS31230	0.78	-0.4
2,384,198	+		RR42_RS31230	0.82	-1.9
2,384,198	+		RR42_RS31230	0.82	+0.4
2,384,199	-		RR42_RS31230	0.82	+0.7
2,384,199	-		RR42_RS31230	0.82	-2.3
2,384,199	-		RR42_RS31230	0.82	-0.7
2,384,199	-		RR42_RS31230	0.82	+0.8
2,384,199	-		RR42_RS31230	0.82	+0.5
2,384,201	+		RR42_RS31230	0.83	+1.4
2,384,201	+		RR42_RS31230	0.83	-0.7
2,384,201	+		RR42_RS31230	0.83	-0.3
2,384,202	-		RR42_RS31230	0.83	-0.9
2,384,202	-		RR42_RS31230	0.83	-0.0
2,384,202	-		RR42_RS31230	0.83	-0.9
2,384,255	+		RR42_RS31230	0.88	+0.7
2,384,264	+		RR42_RS31230	0.89	+0.2
2,384,264	+		RR42_RS31230	0.89	-0.9
2,384,264	+		RR42_RS31230	0.89	+1.9
2,384,284	+				-1.0
2,384,432	+				+0.3
2,384,432	+				-0.1
2,384,433	-				+0.1
2,384,497	+		RR42_RS31235	0.18	+0.9
2,384,497	+		RR42_RS31235	0.18	+1.1
2,384,498	-		RR42_RS31235	0.18	-0.1
2,384,515	-		RR42_RS31235	0.20	-0.6
2,384,629	+		RR42_RS31235	0.36	-0.4
2,384,630	-		RR42_RS31235	0.36	+0.6
2,384,705	-		RR42_RS31235	0.46	+0.6
2,384,855	+		RR42_RS31235	0.66	+0.5
2,385,077	-				+1.3
2,385,077	-				+0.1
2,385,101	+				+0.2
2,385,102	-				+0.3
2,385,102	-				-1.3
2,385,102	-				+0.1
2,385,251	-				+0.5