Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31080

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,353,098	+		RR42_RS31075	0.30	+1.4
2,353,098	+		RR42_RS31075	0.30	+0.1
2,353,098	+		RR42_RS31075	0.30	+0.0
2,353,099	-		RR42_RS31075	0.30	-0.6
2,353,100	+		RR42_RS31075	0.31	-1.1
2,353,101	-		RR42_RS31075	0.31	-0.4
2,353,149	+		RR42_RS31075	0.35	-1.3
2,353,150	-		RR42_RS31075	0.35	+0.5
2,353,167	+		RR42_RS31075	0.37	+1.1
2,353,168	-		RR42_RS31075	0.37	+1.1
2,353,392	+		RR42_RS31075	0.59	+0.4
2,353,392	+		RR42_RS31075	0.59	-1.9
2,353,393	-		RR42_RS31075	0.59	-0.7
2,353,393	-		RR42_RS31075	0.59	-1.6
2,353,476	+		RR42_RS31075	0.67	-1.4
2,353,476	+		RR42_RS31075	0.67	+0.0
2,353,477	-		RR42_RS31075	0.67	+0.1
2,353,477	-		RR42_RS31075	0.67	-1.6
2,353,480	+		RR42_RS31075	0.67	-0.8
2,353,480	+		RR42_RS31075	0.67	-1.3
2,353,481	-		RR42_RS31075	0.68	-2.3
2,353,812	+				-0.5
2,353,812	+				-0.8
2,353,812	+				-0.5
2,353,812	+				+1.9
2,353,917	+				+0.5
2,353,927	-				+0.2
2,354,001	+				-2.1
2,354,001	+				-1.2
2,354,001	+				-0.8
2,354,030	+				-1.3
2,354,031	-				-0.3
2,354,031	-				-1.2
2,354,031	-				-0.3
2,354,031	-				-1.4
2,354,256	-		RR42_RS31080	0.53	+2.9
2,354,256	-		RR42_RS31080	0.53	+0.3
2,354,390	+		RR42_RS31080	0.82	+0.1
2,354,445	-				-1.3
2,354,764	+				-0.3
2,354,862	+		RR42_RS31085	0.23	+1.4
2,354,863	+		RR42_RS31085	0.23	+0.7
2,354,863	+		RR42_RS31085	0.23	+0.5
2,354,863	+		RR42_RS31085	0.23	-2.9
2,354,864	-		RR42_RS31085	0.23	-0.5
2,354,864	-		RR42_RS31085	0.23	-0.4
2,354,864	-		RR42_RS31085	0.23	+0.2
2,354,864	-		RR42_RS31085	0.23	-0.3
2,354,864	-		RR42_RS31085	0.23	-1.0
2,354,864	-		RR42_RS31085	0.23	-0.3
2,354,864	-		RR42_RS31085	0.23	-0.5
2,354,864	-		RR42_RS31085	0.23	-1.6
2,354,865	+		RR42_RS31085	0.23	-0.4
2,354,865	+		RR42_RS31085	0.23	-1.1
2,354,866	-		RR42_RS31085	0.24	+0.3
2,354,866	-		RR42_RS31085	0.24	+0.6
2,354,998	+		RR42_RS31085	0.55	+1.2
2,354,998	+		RR42_RS31085	0.55	-3.2
2,354,999	-		RR42_RS31085	0.55	-0.0
2,354,999	-		RR42_RS31085	0.55	+0.8
2,355,124	-		RR42_RS31085	0.85	-0.0
2,355,217	+				-1.6
2,355,218	-				-2.0
2,355,242	+				+0.1
2,355,243	-				-2.1
2,355,343	+				-1.9
2,355,344	-				-0.6
2,355,348	+				-2.6
2,355,348	+				+0.3
2,355,348	+				-1.0
2,355,348	+				-1.2
2,355,349	-				-1.4
2,355,349	-				+1.6
2,355,349	-				+0.5
2,355,349	-				+0.1
2,355,349	-				+0.2