Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30225

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,156,080	+		RR42_RS30220	0.44	-1.9
2,156,080	+		RR42_RS30220	0.44	+0.1
2,156,081	-		RR42_RS30220	0.44	-0.0
2,156,081	-		RR42_RS30220	0.44	-0.8
2,156,081	-		RR42_RS30220	0.44	+0.1
2,156,081	-		RR42_RS30220	0.44	+0.2
2,156,081	-		RR42_RS30220	0.44	-1.1
2,156,081	-		RR42_RS30220	0.44	-0.8
2,156,081	-		RR42_RS30220	0.44	+1.3
2,156,081	-		RR42_RS30220	0.44	+0.1
2,156,182	+		RR42_RS30220	0.53	-1.5
2,156,183	-		RR42_RS30220	0.53	+0.0
2,156,288	-		RR42_RS30220	0.62	-0.3
2,156,289	+		RR42_RS30220	0.62	-1.0
2,156,311	+		RR42_RS30220	0.64	+0.2
2,156,395	+		RR42_RS30220	0.71	-0.8
2,156,531	+		RR42_RS30220	0.83	-1.8
2,156,532	-		RR42_RS30220	0.83	+1.4
2,156,532	-		RR42_RS30220	0.83	-1.7
2,156,549	-		RR42_RS30220	0.85	+1.1
2,156,620	+				+0.4
2,156,621	-				-0.0
2,156,621	-				-0.1
2,156,870	+				-1.5
2,156,870	+				-0.9
2,156,870	+				+0.2
2,156,870	+				+1.0
2,156,985	+		RR42_RS30225	0.12	-1.0
2,156,985	+		RR42_RS30225	0.12	-2.8
2,156,986	-		RR42_RS30225	0.13	-0.2
2,156,987	+		RR42_RS30225	0.13	+0.2
2,156,988	-		RR42_RS30225	0.13	-2.6
2,157,117	+		RR42_RS30225	0.23	+0.8
2,157,117	+		RR42_RS30225	0.23	-1.7
2,157,118	-		RR42_RS30225	0.23	-0.1
2,157,296	+		RR42_RS30225	0.37	+0.7
2,157,592	+		RR42_RS30225	0.60	-0.7
2,157,640	-		RR42_RS30225	0.64	-1.7
2,158,083	+				-0.3
2,158,108	+				-2.0
2,158,108	+				+0.1
2,158,109	-				+0.4
2,158,192	+				+1.9
2,158,627	+		RR42_RS30230	0.37	-0.6
2,158,659	-		RR42_RS30230	0.39	-1.9
2,158,685	-		RR42_RS30230	0.41	+0.9
2,158,685	-		RR42_RS30230	0.41	-0.8
2,158,729	+		RR42_RS30230	0.44	+0.0
2,158,729	+		RR42_RS30230	0.44	-0.6
2,158,730	-		RR42_RS30230	0.44	-1.2
2,158,733	+		RR42_RS30230	0.45	+0.5
2,158,734	-		RR42_RS30230	0.45	+1.9
2,158,734	-		RR42_RS30230	0.45	-0.9
2,158,810	+		RR42_RS30230	0.50	+1.1
2,158,811	-		RR42_RS30230	0.50	-1.6