Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30035

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,109,267	+				+0.2
2,109,268	-				-1.2
2,109,301	+				+0.7
2,109,511	-				+1.5
2,109,615	-				-1.4
2,109,615	-				-4.3
2,109,662	+				-1.1
2,109,675	+				-0.3
2,109,750	-				+0.5
2,109,799	-				-0.6
2,109,845	+				+0.4
2,109,845	+				-0.1
2,109,845	+				-0.9
2,109,846	-				-1.2
2,109,917	+				+0.5
2,109,918	-				+2.2
2,109,918	-				+1.3
2,109,918	-				-1.4
2,109,919	+				-0.2
2,109,920	-				+0.2
2,110,102	+		RR42_RS30030	0.55	-0.1
2,110,102	+		RR42_RS30030	0.55	+0.4
2,110,102	+		RR42_RS30030	0.55	+0.5
2,110,103	-		RR42_RS30030	0.55	+0.2
2,110,603	+		RR42_RS30035	0.37	-1.3
2,110,603	+		RR42_RS30035	0.37	-1.1
2,110,604	-		RR42_RS30035	0.38	-2.0
2,110,657	+		RR42_RS30035	0.43	-2.2
2,110,657	+		RR42_RS30035	0.43	+0.8
2,110,658	-		RR42_RS30035	0.43	-0.4
2,110,931	+		RR42_RS30035	0.69	+0.6
2,110,932	-		RR42_RS30035	0.69	+1.6
2,111,017	+		RR42_RS30035	0.77	-0.6
2,111,018	-		RR42_RS30035	0.77	+0.4
2,111,070	+		RR42_RS30035	0.82	+0.1
2,111,070	+		RR42_RS30035	0.82	+1.1
2,111,071	-		RR42_RS30035	0.82	+1.0
2,111,119	+		RR42_RS30035	0.87	-2.7
2,111,119	+		RR42_RS30035	0.87	+0.7
2,111,120	-		RR42_RS30035	0.87	-0.3
2,111,120	-		RR42_RS30035	0.87	-1.1
2,111,385	-				-1.5
2,111,385	-				+0.7
2,111,385	-				+0.3
2,111,385	-				+1.0
2,111,385	-				+1.5
2,111,385	-				+1.3
2,111,414	+				+0.0
2,111,414	+				+1.1
2,111,414	+				+1.5
2,111,415	-				+0.6
2,111,417	-				-0.6
2,111,417	-				-0.5
2,111,708	+		RR42_RS30040	0.23	+0.6
2,111,981	-		RR42_RS30040	0.37	-1.8
2,111,981	-		RR42_RS30040	0.37	-1.4
2,111,981	-		RR42_RS30040	0.37	-1.7