Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28915

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,843,139	-				+0.4
1,843,141	-				-0.8
1,843,186	-		RR42_RS28910	0.15	+0.3
1,843,186	-		RR42_RS28910	0.15	-0.3
1,843,312	+		RR42_RS28910	0.29	+1.6
1,843,312	+		RR42_RS28910	0.29	+1.1
1,843,313	-		RR42_RS28910	0.30	+1.3
1,843,313	-		RR42_RS28910	0.30	-1.4
1,844,004	+				-0.1
1,844,004	+				+1.8
1,844,005	-				+0.4
1,844,102	+				+1.0
1,844,186	-		RR42_RS28915	0.12	-0.2
1,844,374	+		RR42_RS28915	0.46	-0.6
1,844,524	+		RR42_RS28915	0.73	-0.5
1,844,524	+		RR42_RS28915	0.73	+1.0
1,844,524	+		RR42_RS28915	0.73	+0.6
1,844,524	+		RR42_RS28915	0.73	+0.5
1,844,524	+		RR42_RS28915	0.73	-0.3
1,844,524	+		RR42_RS28915	0.73	-1.2
1,844,524	+		RR42_RS28915	0.73	+0.5
1,844,525	-		RR42_RS28915	0.74	-0.1
1,844,549	-		RR42_RS28915	0.78	+0.8
1,844,561	-		RR42_RS28915	0.80	-0.7
1,844,789	-				-0.1
1,844,895	+		RR42_RS28920	0.25	-2.8
1,844,895	+		RR42_RS28920	0.25	-2.4
1,844,895	+		RR42_RS28920	0.25	+0.6
1,844,895	+		RR42_RS28920	0.25	+1.4
1,844,895	+		RR42_RS28920	0.25	-0.6
1,845,032	+				+0.8
1,845,032	+				-1.9
1,845,033	-				-1.5
1,845,033	-				+0.4
1,845,053	-				-0.4
1,845,053	-				+0.6
1,845,104	+				+0.2
1,845,314	+				+3.4
1,845,374	-				-0.2
1,845,378	+				-0.6
1,845,379	-				-2.3
1,845,405	+				-1.7
1,845,558	+				+2.7
1,845,558	+				-0.1
1,845,664	-				-2.5