Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28315

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,712,613	+				-0.9
1,712,617	+				+0.3
1,712,618	-				+1.5
1,712,618	-				-2.1
1,712,848	+				-0.6
1,712,889	+				-0.2
1,713,010	-				-2.3
1,713,097	+				+1.1
1,713,099	+				+0.7
1,713,100	-				+1.7
1,713,112	-				-0.5
1,713,124	-				-1.3
1,713,124	-				-0.5
1,713,185	+				+0.5
1,713,186	-				-1.1
1,713,186	-				+0.2
1,713,193	+				+0.2
1,713,193	+				-0.1
1,713,307	-				+1.8
1,713,440	-				+0.7
1,713,440	-				-0.1
1,713,446	+				-0.3
1,713,454	+				+2.0
1,713,519	-		RR42_RS28315	0.11	-3.1
1,713,582	-		RR42_RS28315	0.20	-3.7
1,713,682	+		RR42_RS28315	0.35	-2.5
1,713,864	+		RR42_RS28315	0.62	+3.3
1,713,864	+		RR42_RS28315	0.62	-0.8
1,713,865	-		RR42_RS28315	0.62	-0.8
1,713,909	-		RR42_RS28315	0.69	-0.5
1,714,108	-				-0.3
1,714,108	-				-0.1
1,714,134	-				-1.2
1,714,134	-				-2.9
1,714,134	-				+1.7
1,714,134	-				+0.1
1,714,415	+		RR42_RS28320	0.11	-1.8
1,714,415	+		RR42_RS28320	0.11	-0.6
1,714,457	+		RR42_RS28320	0.15	+1.5
1,714,458	-		RR42_RS28320	0.15	+0.7
1,714,541	+		RR42_RS28320	0.23	+0.3
1,714,542	-		RR42_RS28320	0.23	-0.1
1,714,727	+		RR42_RS28320	0.40	-1.3
1,714,764	-		RR42_RS28320	0.44	+1.5
1,714,797	-		RR42_RS28320	0.47	-0.0
1,714,814	+		RR42_RS28320	0.48	+1.2
1,714,898	+		RR42_RS28320	0.56	-1.5
1,714,898	+		RR42_RS28320	0.56	+2.4
1,714,899	-		RR42_RS28320	0.56	-0.1
1,714,955	+		RR42_RS28320	0.61	-0.1
1,714,955	+		RR42_RS28320	0.61	-2.2
1,714,982	+		RR42_RS28320	0.64	+1.7
1,714,982	+		RR42_RS28320	0.64	+0.2
1,714,983	-		RR42_RS28320	0.64	-2.2
1,714,983	-		RR42_RS28320	0.64	+0.7
1,715,012	+		RR42_RS28320	0.67	-0.3
1,715,012	+		RR42_RS28320	0.67	+0.7
1,715,013	-		RR42_RS28320	0.67	-1.3
1,715,029	+		RR42_RS28320	0.68	+0.7
1,715,029	+		RR42_RS28320	0.68	-1.9