Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28290

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,706,629	-		RR42_RS28285	0.69	-1.3
1,706,629	-		RR42_RS28285	0.69	-1.8
1,706,849	+		RR42_RS28285	0.84	-0.8
1,706,918	+		RR42_RS28285	0.89	-0.6
1,706,918	+		RR42_RS28285	0.89	+1.3
1,706,918	+		RR42_RS28285	0.89	-0.9
1,706,919	-		RR42_RS28285	0.89	-2.4
1,706,931	-		RR42_RS28285	0.90	-1.5
1,706,978	+				-0.4
1,707,016	-				+1.3
1,707,164	+				-0.1
1,707,164	+				-0.4
1,707,165	-				+2.6
1,707,165	-				+0.9
1,707,168	+				-1.0
1,707,168	+				+0.1
1,707,168	+				+1.7
1,707,168	+				-0.3
1,707,169	-				+0.4
1,707,169	-				+1.2
1,707,169	-				-0.3
1,707,169	-				+1.1
1,707,169	-				+0.7
1,707,169	-				+0.1
1,707,169	-				-1.2
1,707,169	-				+0.7
1,707,173	+				-0.5
1,707,174	-				+0.7
1,707,174	-				-1.5
1,707,193	+				-1.7
1,707,194	-				-3.2
1,707,194	-				+0.3
1,707,353	+				-0.5
1,707,354	-				-0.2
1,707,360	-				+0.7
1,707,360	-				+0.4
1,707,374	-				+1.6
1,707,479	-				-0.7
1,707,575	+				+0.6
1,707,794	+		RR42_RS28290	0.38	-2.1
1,707,794	+		RR42_RS28290	0.38	-2.9
1,707,794	+		RR42_RS28290	0.38	-0.8
1,707,795	-		RR42_RS28290	0.39	-1.0
1,708,040	-		RR42_RS28290	0.80	-4.4
1,708,271	+				+1.4
1,708,272	-				+0.6
1,708,272	-				-0.7
1,708,360	+				+1.0
1,708,360	+				+1.4
1,708,409	+		RR42_RS28295	0.13	-1.3
1,708,409	+		RR42_RS28295	0.13	+0.0
1,708,410	-		RR42_RS28295	0.13	+0.0
1,708,498	+		RR42_RS28295	0.21	+0.5
1,708,499	-		RR42_RS28295	0.21	-0.2
1,708,499	-		RR42_RS28295	0.21	-1.7
1,708,508	-		RR42_RS28295	0.21	-2.8
1,708,693	+		RR42_RS28295	0.37	-0.3
1,708,693	+		RR42_RS28295	0.37	-0.8
1,709,014	+		RR42_RS28295	0.64	+0.1
1,709,140	+		RR42_RS28295	0.74	+1.8