Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27670

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,569,096	+				+0.6
1,569,239	+				+0.2
1,569,239	+				-2.2
1,569,239	+				+0.6
1,569,320	+		RR42_RS27665	0.14	+0.6
1,569,321	-		RR42_RS27665	0.14	+0.0
1,569,341	+		RR42_RS27665	0.18	+0.9
1,569,342	-		RR42_RS27665	0.18	-0.1
1,569,894	+		RR42_RS27670	0.15	-2.6
1,569,894	+		RR42_RS27670	0.15	-0.1
1,569,895	-		RR42_RS27670	0.15	-0.3
1,569,923	-		RR42_RS27670	0.18	-0.8
1,570,030	-		RR42_RS27670	0.29	+0.9
1,570,110	-		RR42_RS27670	0.37	+1.4
1,570,110	-		RR42_RS27670	0.37	-0.2
1,570,137	+		RR42_RS27670	0.40	-0.2
1,570,137	+		RR42_RS27670	0.40	-0.0
1,570,137	+		RR42_RS27670	0.40	+0.8
1,570,200	+		RR42_RS27670	0.46	-0.0
1,570,216	-		RR42_RS27670	0.48	-0.6
1,570,515	+		RR42_RS27670	0.79	-2.2
1,570,515	+		RR42_RS27670	0.79	+0.5
1,570,516	-		RR42_RS27670	0.80	+0.1
1,570,518	+		RR42_RS27670	0.80	-1.6
1,570,519	-		RR42_RS27670	0.80	-0.8
1,570,886	-				-0.2
1,570,926	-				+0.2
1,570,948	+				-0.3
1,570,948	+				-0.4
1,570,948	+				-1.0
1,570,948	+				-0.0
1,570,949	-				+0.1
1,570,967	-				-0.5
1,571,044	+				+0.9
1,571,045	-				+0.7
1,571,125	-		RR42_RS27675	0.13	-2.1
1,571,178	+		RR42_RS27675	0.19	+1.2
1,571,178	+		RR42_RS27675	0.19	+1.7
1,571,178	+		RR42_RS27675	0.19	-1.5
1,571,586	+		RR42_RS27675	0.63	-0.0
1,571,587	-		RR42_RS27675	0.63	+1.2
1,571,590	-		RR42_RS27675	0.63	+0.9
1,571,598	+		RR42_RS27675	0.64	-0.0
1,571,632	-		RR42_RS27675	0.68	-1.2