Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27260

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,467,779	-		RR42_RS27255	0.25	-1.4
1,467,779	-		RR42_RS27255	0.25	-3.1
1,467,779	-		RR42_RS27255	0.25	+1.5
1,467,908	+		RR42_RS27255	0.42	-0.9
1,467,967	-		RR42_RS27255	0.50	-1.1
1,468,060	+		RR42_RS27255	0.63	-2.9
1,468,060	+		RR42_RS27255	0.63	+0.4
1,468,060	+		RR42_RS27255	0.63	+0.7
1,468,061	-		RR42_RS27255	0.63	+0.5
1,468,063	+		RR42_RS27255	0.63	-0.4
1,468,064	-		RR42_RS27255	0.63	-0.1
1,468,071	+		RR42_RS27255	0.64	+0.2
1,468,096	+		RR42_RS27255	0.67	-1.5
1,468,097	-		RR42_RS27255	0.68	+1.3
1,468,097	-		RR42_RS27255	0.68	+0.0
1,468,100	+		RR42_RS27255	0.68	+2.1
1,468,100	+		RR42_RS27255	0.68	-0.1
1,468,100	+		RR42_RS27255	0.68	-2.1
1,468,100	+		RR42_RS27255	0.68	-0.1
1,468,100	+		RR42_RS27255	0.68	+1.0
1,468,100	+		RR42_RS27255	0.68	+0.4
1,468,131	+		RR42_RS27255	0.72	+0.8
1,468,131	+		RR42_RS27255	0.72	-0.1
1,468,207	+		RR42_RS27255	0.82	+1.0
1,468,208	-		RR42_RS27255	0.82	-0.1
1,468,274	+				-0.0
1,468,278	+				-0.9
1,468,278	+				-0.0
1,468,279	-				-0.0
1,468,279	-				-0.9
1,468,337	-				+1.5
1,468,337	-				+0.6
1,468,491	-				+0.1
1,468,506	-				-0.1
1,468,513	-				+0.1
1,468,669	-				+0.7
1,468,669	-				+0.2
1,468,675	+				+0.4
1,468,868	+				-1.1
1,468,868	+				-0.2
1,468,869	-				-3.3
1,468,869	-				+0.5
1,468,947	-		RR42_RS27260	0.16	+1.5
1,468,947	-		RR42_RS27260	0.16	-0.5
1,469,006	-		RR42_RS27260	0.22	+0.9
1,469,018	+		RR42_RS27260	0.23	-2.7
1,469,019	-		RR42_RS27260	0.23	-1.6
1,469,019	-		RR42_RS27260	0.23	-0.5
1,469,204	+		RR42_RS27260	0.39	-0.8
1,469,327	-		RR42_RS27260	0.50	+0.2
1,469,499	-		RR42_RS27260	0.65	-0.1
1,469,499	-		RR42_RS27260	0.65	+0.5
1,469,523	-		RR42_RS27260	0.67	-0.3
1,469,523	-		RR42_RS27260	0.67	+2.5
1,469,523	-		RR42_RS27260	0.67	+0.8
1,469,630	+		RR42_RS27260	0.77	-1.3
1,469,630	+		RR42_RS27260	0.77	+0.3
1,469,631	-		RR42_RS27260	0.77	+0.5
1,469,631	-		RR42_RS27260	0.77	-0.5
1,469,704	+		RR42_RS27260	0.83	+1.1
1,469,704	+		RR42_RS27260	0.83	+1.2
1,469,705	-		RR42_RS27260	0.84	+0.3
1,469,705	-		RR42_RS27260	0.84	-0.3
1,469,763	-		RR42_RS27260	0.89	-0.8
1,469,763	-		RR42_RS27260	0.89	+1.1
1,469,763	-		RR42_RS27260	0.89	+3.7
1,469,949	-				+1.7
1,470,027	+				-0.3
1,470,027	+				+0.3
1,470,027	+				-0.4
1,470,028	-				+0.5
1,470,050	-				-0.7
1,470,128	+		RR42_RS27265	0.14	+0.5
1,470,129	-		RR42_RS27265	0.14	-1.0
1,470,154	-		RR42_RS27265	0.17	-0.1
1,470,204	+		RR42_RS27265	0.22	-0.7
1,470,254	+		RR42_RS27265	0.27	-0.9
1,470,254	+		RR42_RS27265	0.27	+1.5
1,470,254	+		RR42_RS27265	0.27	+1.1
1,470,408	+		RR42_RS27265	0.43	-0.5
1,470,408	+		RR42_RS27265	0.43	-0.4
1,470,409	-		RR42_RS27265	0.43	+0.4
1,470,409	-		RR42_RS27265	0.43	+0.5
1,470,495	+		RR42_RS27265	0.52	-0.3
1,470,496	-		RR42_RS27265	0.52	+0.7
1,470,552	+		RR42_RS27265	0.58	+0.7
1,470,552	+		RR42_RS27265	0.58	+0.7
1,470,553	-		RR42_RS27265	0.58	+0.8
1,470,559	+		RR42_RS27265	0.59	-1.3
1,470,634	-		RR42_RS27265	0.67	+0.1
1,470,648	+		RR42_RS27265	0.68	+0.2
1,470,649	-		RR42_RS27265	0.68	-2.5
1,470,649	-		RR42_RS27265	0.68	-1.3
1,470,700	-		RR42_RS27265	0.73	-0.4
1,470,883	-				+0.9
1,470,883	-				-1.0
1,470,883	-				-0.0