Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26345

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,267,107	-				-2.2
1,267,269	+				-2.2
1,267,270	-				-0.6
1,267,733	+		RR42_RS26340	0.69	-0.7
1,267,733	+		RR42_RS26340	0.69	+0.3
1,267,733	+		RR42_RS26340	0.69	-1.2
1,267,734	-		RR42_RS26340	0.69	-0.2
1,267,818	+		RR42_RS26340	0.80	-0.4
1,267,819	-		RR42_RS26340	0.80	-1.3
1,267,819	-		RR42_RS26340	0.80	-0.6
1,267,929	+				+1.3
1,267,929	+				-1.5
1,267,930	-				-1.7
1,268,058	+				+0.1
1,268,058	+				-0.0
1,268,059	-				+1.1
1,268,059	-				-1.3
1,268,059	-				-0.5
1,268,063	+				-0.5
1,268,063	+				+0.3
1,268,063	+				+0.2
1,268,063	+				+0.5
1,268,063	+				-1.5
1,268,064	-				+1.7
1,268,064	-				+0.0
1,268,064	-				-2.2
1,268,070	-				-0.8
1,268,070	-				+0.7
1,269,068	+		RR42_RS26350	0.22	-3.1
1,269,102	-		RR42_RS26350	0.32	-2.5
1,269,113	+		RR42_RS26350	0.35	-1.9
1,269,114	-		RR42_RS26350	0.35	-1.5
1,269,314	+				-0.6
1,269,342	-				-0.7
1,269,370	+				-0.8
1,269,370	+				-1.4
1,269,370	+				+1.0
1,269,424	-				-2.2
1,269,496	+				-1.1
1,269,496	+				+0.5
1,269,496	+				-0.9
1,269,497	-				+0.3
1,269,554	-				+0.1
1,269,841	+		RR42_RS26355	0.16	-0.3
1,269,842	-		RR42_RS26355	0.16	-1.3
1,269,878	+		RR42_RS26355	0.19	+0.1