Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25975

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,172,003	+		RR42_RS25970	0.26	+0.1
1,172,004	-		RR42_RS25970	0.26	+0.5
1,172,196	-		RR42_RS25970	0.42	-1.9
1,172,324	+		RR42_RS25970	0.54	-0.5
1,172,325	-		RR42_RS25970	0.54	+0.4
1,172,508	+		RR42_RS25970	0.69	-1.3
1,172,683	-		RR42_RS25970	0.85	-3.0
1,172,683	-		RR42_RS25970	0.85	+0.1
1,172,802	+				-0.2
1,172,802	+				+0.7
1,172,802	+				+0.3
1,172,803	-				-1.2
1,172,803	-				+0.9
1,172,939	+				+0.9
1,172,939	+				-1.9
1,172,940	-				-1.1
1,172,947	-				+0.4
1,173,263	+				+1.2
1,173,268	+				+0.6
1,173,269	-				+0.1
1,173,362	+				+1.0
1,173,362	+				-0.2
1,173,363	-				+0.2
1,173,363	-				-0.9
1,173,369	+				-0.5
1,173,369	+				+1.3
1,173,370	-				+1.5
1,173,437	+				-1.5
1,173,528	+		RR42_RS25980	0.17	+2.7
1,173,655	+		RR42_RS25980	0.37	-0.5
1,173,655	+		RR42_RS25980	0.37	-0.9
1,173,655	+		RR42_RS25980	0.37	-2.1
1,173,655	+		RR42_RS25980	0.37	+0.6
1,173,912	-				-0.7
1,173,912	-		RR42_RS25980	0.77	-0.6
1,173,912	-		RR42_RS25980	0.77	+0.3
1,173,947	+		RR42_RS25980	0.83	+0.3
1,173,947	+		RR42_RS25980	0.83	-0.9
1,174,149	+				-2.3
1,174,149	+				+0.5
1,174,149	+				-0.7
1,174,150	-				-2.3
1,174,150	-				+0.7
1,174,181	-				-0.0