Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25585

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,083,328	-				+0.6
1,083,350	+				+0.5
1,083,350	+				-0.9
1,083,351	-				-0.9
1,083,431	+		RR42_RS25580	0.21	-0.2
1,083,432	-		RR42_RS25580	0.21	-2.3
1,083,432	-		RR42_RS25580	0.21	-2.7
1,083,668	-		RR42_RS25580	0.54	-0.1
1,083,705	+		RR42_RS25580	0.60	-1.9
1,083,746	+		RR42_RS25580	0.65	+0.6
1,083,746	+		RR42_RS25580	0.65	+1.0
1,083,747	-		RR42_RS25580	0.66	+0.2
1,083,875	+		RR42_RS25580	0.84	+0.8
1,083,875	+		RR42_RS25580	0.84	-0.6
1,083,876	-		RR42_RS25580	0.84	+1.4
1,083,876	-		RR42_RS25580	0.84	-1.7
1,084,116	+				-0.7
1,084,116	+				-0.3
1,084,117	-				-0.9
1,084,131	+				+0.8
1,084,199	+				+0.3
1,084,307	+				+0.7
1,084,308	-				+0.4
1,084,335	-				-0.3
1,084,453	+		RR42_RS25585	0.19	+0.2
1,084,453	+		RR42_RS25585	0.19	-2.4
1,084,728	-		RR42_RS25585	0.43	+1.2
1,084,750	+		RR42_RS25585	0.45	+0.7
1,084,887	-		RR42_RS25585	0.57	+0.5
1,084,920	-		RR42_RS25585	0.59	-2.8
1,084,920	-		RR42_RS25585	0.59	+0.6
1,084,989	-		RR42_RS25585	0.65	+0.8
1,084,989	-		RR42_RS25585	0.65	-0.5
1,084,995	-		RR42_RS25585	0.66	+0.6
1,085,075	+		RR42_RS25585	0.73	-0.0
1,085,076	-		RR42_RS25585	0.73	+2.5
1,085,078	+		RR42_RS25585	0.73	-0.8
1,085,097	-		RR42_RS25585	0.75	-0.5
1,085,133	-		RR42_RS25585	0.78	-1.5
1,085,138	+		RR42_RS25585	0.78	-0.6
1,085,139	-		RR42_RS25585	0.78	-0.8
1,085,210	+		RR42_RS25585	0.84	+0.1
1,085,227	+		RR42_RS25585	0.86	+0.0
1,085,237	+		RR42_RS25585	0.87	+0.9
1,085,238	-		RR42_RS25585	0.87	-2.0
1,085,328	-				-0.7
1,085,447	-				+0.7
1,085,447	-				-0.3
1,085,612	-				+0.7
1,085,683	+				-0.2
1,085,723	-				-1.9
1,085,969	-		RR42_RS25590	0.10	-0.5
1,085,989	+		RR42_RS25590	0.13	+0.5
1,085,990	-		RR42_RS25590	0.13	-0.3
1,085,990	-		RR42_RS25590	0.13	-1.5
1,086,281	-		RR42_RS25590	0.52	+0.4
1,086,281	-		RR42_RS25590	0.52	+0.3