Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25570

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
1,079,772	+		RR42_RS25565	0.18	-1.1
1,079,772	+		RR42_RS25565	0.18	+0.1
1,079,773	-		RR42_RS25565	0.18	-1.7
1,079,879	-		RR42_RS25565	0.27	-0.1
1,080,139	-		RR42_RS25565	0.50	-0.7
1,080,139	-		RR42_RS25565	0.50	+0.3
1,080,139	-		RR42_RS25565	0.50	+0.1
1,080,142	-		RR42_RS25565	0.50	-0.9
1,080,142	-		RR42_RS25565	0.50	-1.1
1,080,211	-		RR42_RS25565	0.56	+0.1
1,080,213	+		RR42_RS25565	0.56	-0.1
1,080,214	-		RR42_RS25565	0.56	+4.4
1,080,300	+		RR42_RS25565	0.64	-2.1
1,080,301	-		RR42_RS25565	0.64	+2.0
1,080,303	+		RR42_RS25565	0.64	-0.7
1,080,408	+		RR42_RS25565	0.73	+0.3
1,080,410	+		RR42_RS25565	0.73	-0.3
1,080,457	-		RR42_RS25565	0.77	-1.7
1,080,721	-				+0.9
1,080,721	-				-0.1
1,080,838	+				-3.8
1,080,862	+				+0.3
1,080,968	-		RR42_RS25570	0.15	+1.9
1,081,014	+		RR42_RS25570	0.17	+1.3
1,081,015	-		RR42_RS25570	0.17	+1.5
1,081,015	-		RR42_RS25570	0.17	+0.1
1,081,210	+		RR42_RS25570	0.29	+0.1
1,081,288	+		RR42_RS25570	0.34	-0.8
1,081,289	-		RR42_RS25570	0.34	+0.2
1,081,289	-		RR42_RS25570	0.34	-0.0
1,081,353	+		RR42_RS25570	0.38	-1.9
1,081,376	+		RR42_RS25570	0.39	+0.6
1,081,417	+		RR42_RS25570	0.41	-0.7
1,081,417	+		RR42_RS25570	0.41	-1.5
1,081,417	+		RR42_RS25570	0.41	+0.8
1,081,465	+		RR42_RS25570	0.44	-2.1
1,081,465	+		RR42_RS25570	0.44	-0.9
1,081,848	+		RR42_RS25570	0.67	+1.0
1,081,936	+		RR42_RS25570	0.72	+0.8
1,081,936	+		RR42_RS25570	0.72	+0.0
1,082,211	-		RR42_RS25570	0.89	+0.1
1,082,234	-				+1.4
1,082,234	-				-0.1
1,082,429	-				-2.3
1,082,429	-				-0.8
1,082,433	-				-0.1
1,082,449	+				-1.1
1,082,449	+				-2.5
1,082,449	+				-0.7
1,082,450	-				-0.3
1,082,450	-				+0.1
1,082,778	+		RR42_RS25575	0.44	-0.6
1,082,847	-		RR42_RS25575	0.53	+0.7
1,082,847	-		RR42_RS25575	0.53	+0.4
1,082,867	-		RR42_RS25575	0.56	-1.0
1,082,875	+		RR42_RS25575	0.57	-2.1
1,082,876	-		RR42_RS25575	0.57	-0.9
1,082,876	-		RR42_RS25575	0.57	-2.5
1,082,883	+		RR42_RS25575	0.58	-1.9
1,082,883	+		RR42_RS25575	0.58	+2.7
1,082,942	-		RR42_RS25575	0.66	+0.0
1,082,976	-		RR42_RS25575	0.70	-2.3
1,082,976	-		RR42_RS25575	0.70	+0.1
1,082,976	-		RR42_RS25575	0.70	-0.6
1,083,010	+		RR42_RS25575	0.75	+1.1
1,083,010	+		RR42_RS25575	0.75	-1.2
1,083,011	-		RR42_RS25575	0.75	+0.7
1,083,177	+				+0.6
1,083,328	-				+0.6
1,083,350	+				+0.5
1,083,350	+				-0.9
1,083,351	-				-0.9