Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS21230

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
87,079	-				+0.1
87,209	-				+3.3
87,209	-				+2.8
87,209	-				+2.7
87,597	-				+3.4
87,619	-				+0.2
87,989	-				+1.7
88,048	+				+0.3
88,049	-				-1.3
88,049	-				-1.0
88,282	+		RR42_RS21230	0.24	+1.1
88,283	-		RR42_RS21230	0.24	-2.4
88,384	+		RR42_RS21230	0.34	+0.5
88,384	+		RR42_RS21230	0.34	-1.2
88,384	+		RR42_RS21230	0.34	+0.5
88,385	-		RR42_RS21230	0.34	+0.1
88,468	+		RR42_RS21230	0.42	+1.0
88,468	+		RR42_RS21230	0.42	+0.4
88,555	+		RR42_RS21230	0.51	+0.5
88,556	-		RR42_RS21230	0.51	+0.4
88,556	-		RR42_RS21230	0.51	-0.2
88,556	-		RR42_RS21230	0.51	+2.0
88,751	+		RR42_RS21230	0.71	-2.8
88,751	+		RR42_RS21230	0.71	-1.9
88,751	+		RR42_RS21230	0.71	-1.3
88,751	+		RR42_RS21230	0.71	+0.2
88,751	+		RR42_RS21230	0.71	-0.6
88,751	+		RR42_RS21230	0.71	-1.5
88,752	-		RR42_RS21230	0.71	-2.5
88,752	-		RR42_RS21230	0.71	-0.4
88,752	-		RR42_RS21230	0.71	+0.2
88,752	-		RR42_RS21230	0.71	+0.0
88,753	+		RR42_RS21230	0.71	-1.1
88,754	-		RR42_RS21230	0.71	+1.1
88,780	+		RR42_RS21230	0.74	+0.1
88,780	+		RR42_RS21230	0.74	+0.5
88,781	-		RR42_RS21230	0.74	+0.5
88,794	-		RR42_RS21230	0.75	-1.1
89,019	+				+2.3
89,019	+				+0.3
89,068	+				+0.9
89,068	+				-0.6
89,068	+				+0.6
89,069	-				-0.1
89,069	-				+3.0
89,111	+				-1.7
89,112	-				-2.9
89,584	+		RR42_RS21235	0.23	-0.5
89,584	+		RR42_RS21235	0.23	-1.0
89,585	-		RR42_RS21235	0.23	+0.2
89,585	-		RR42_RS21235	0.23	+0.1