Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20285

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,386,969	+		RR42_RS20275	0.89	+0.9
4,386,993	+				-0.4
4,386,994	-				-1.7
4,387,109	+				+0.7
4,387,110	-				+0.8
4,387,146	+				+1.1
4,387,147	-				+0.7
4,387,284	-		RR42_RS20280	0.13	-0.7
4,387,284	-		RR42_RS20280	0.13	+0.1
4,387,344	-		RR42_RS20280	0.21	-1.8
4,387,545	-		RR42_RS20280	0.49	+0.2
4,387,545	-		RR42_RS20280	0.49	+1.2
4,387,665	-		RR42_RS20280	0.65	-0.6
4,387,965	+				+0.2
4,387,966	-				-0.3
4,387,966	-				-0.7
4,387,967	+				-0.6
4,387,967	+				+0.3
4,387,967	+				+0.5
4,387,967	+				-3.4
4,387,968	-				+0.1
4,387,996	+				-0.0
4,387,997	-				+0.8
4,388,007	-		RR42_RS20285	0.10	-1.5
4,388,042	-		RR42_RS20285	0.15	+1.7
4,388,360	+		RR42_RS20285	0.56	-1.6
4,388,361	-		RR42_RS20285	0.56	-0.5
4,388,526	+		RR42_RS20285	0.77	-1.2
4,388,526	+		RR42_RS20285	0.77	+0.4
4,388,527	-		RR42_RS20285	0.77	-0.7
4,388,852	+				+0.2
4,388,852	+				-1.6
4,388,853	-				-1.2
4,388,856	+				+2.2
4,388,856	+				+0.1
4,388,857	-				+0.7
4,388,857	-				+0.2
4,388,869	+				-0.1
4,388,870	-				-0.6
4,388,972	+				-1.2
4,388,972	+				+0.6
4,388,972	+				+0.7
4,388,972	+				-1.0
4,388,973	-				-1.1
4,389,082	+				-0.2
4,389,082	+				+0.3
4,389,082	+				+0.5
4,389,558	-		RR42_RS20290	0.28	+1.1
4,389,558	-		RR42_RS20290	0.28	-0.9