Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19750

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,262,910	+		RR42_RS19745	0.25	+0.5
4,262,936	+		RR42_RS19745	0.28	+1.0
4,263,128	+		RR42_RS19745	0.51	+1.9
4,263,256	-		RR42_RS19745	0.66	+1.2
4,263,541	-				-1.6
4,263,557	+				+0.3
4,263,557	+				-0.6
4,263,571	+				-0.7
4,263,572	-				-0.6
4,263,572	-				-0.6
4,263,577	+				-0.7
4,263,577	+				-0.4
4,263,578	-				+1.0
4,263,589	+				+0.7
4,263,590	-				+0.9
4,263,750	-				+0.6
4,263,884	+				-0.6
4,263,884	+				+0.6
4,263,884	+				+0.1
4,263,884	+				+1.0
4,263,885	-				+0.0
4,263,885	-				+1.3
4,264,252	+		RR42_RS19750	0.58	-0.6
4,264,253	-		RR42_RS19750	0.58	+1.0
4,264,493	-				-0.9
4,264,522	+				-3.3
4,264,523	-				-1.0
4,264,523	-				-0.2
4,264,646	-				-0.1
4,264,646	-				-0.6
4,264,646	-				-0.3
4,264,646	-				+0.8
4,264,646	-				-0.3
4,264,646	-				+0.3
4,264,882	+		RR42_RS19755	0.43	+0.0
4,264,883	-		RR42_RS19755	0.43	-1.2
4,264,966	+		RR42_RS19755	0.56	-3.3
4,264,967	-		RR42_RS19755	0.56	+1.1
4,265,309	+				-0.8
4,265,309	+				+0.6
4,265,310	-				-1.8
4,265,311	+				-1.3
4,265,311	+				-0.0
4,265,312	-				-3.2
4,265,312	-				-0.0
4,265,312	-				-0.9
4,265,315	+				+0.1
4,265,316	-				-1.2
4,265,316	-				-0.1
4,265,322	+				+0.3
4,265,322	+				-1.1
4,265,322	+				+0.8
4,265,322	+				+0.5
4,265,322	+				-1.4
4,265,322	+				-0.2
4,265,322	+				-1.3
4,265,322	+				+0.2
4,265,322	+				-1.2
4,265,322	+				+0.5
4,265,323	-				-0.3
4,265,323	-				-2.5
4,265,323	-				-1.5
4,265,323	-				-0.0
4,265,323	-				-1.2
4,265,323	-				+0.1
4,265,323	-				-1.6
4,265,323	-				-0.2
4,265,323	-				+0.7
4,265,323	-				-0.0
4,265,323	-				+0.4
4,265,324	+				+1.3
4,265,325	-				-0.7
4,265,325	-				+0.4
4,265,325	-				-1.6
4,265,325	-				-2.8
4,265,375	+				+1.3
4,265,375	+				+0.6
4,265,376	-				-0.7
4,265,377	+				-3.0
4,265,377	+				+0.2
4,265,377	+				-0.9
4,265,377	+				+0.1
4,265,377	+				+0.3
4,265,377	+				-0.5
4,265,378	-				+1.4
4,265,378	-				-0.4
4,265,378	-				-1.0