Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19260

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,158,358	+				-1.8
4,158,358	+				-1.6
4,158,358	+				-1.6
4,158,359	-				-0.8
4,158,359	-				+0.8
4,158,359	-				-0.8
4,158,359	-				-1.6
4,158,409	+				+1.2
4,158,565	+		RR42_RS19260	0.32	-1.2
4,158,565	+		RR42_RS19260	0.32	-0.1
4,158,566	-		RR42_RS19260	0.32	-0.9
4,158,566	-		RR42_RS19260	0.32	-0.4
4,159,118	+		RR42_RS19265	0.17	-0.8
4,159,118	+		RR42_RS19265	0.17	-0.4
4,159,119	-		RR42_RS19265	0.18	-0.6
4,159,249	+		RR42_RS19265	0.28	+0.8
4,159,250	-		RR42_RS19265	0.28	+0.1
4,159,250	-		RR42_RS19265	0.28	+0.4
4,159,402	-		RR42_RS19265	0.40	-0.9
4,159,402	-		RR42_RS19265	0.40	+0.7
4,159,402	-		RR42_RS19265	0.40	-1.2
4,159,402	-		RR42_RS19265	0.40	+1.1
4,159,444	-		RR42_RS19265	0.44	+0.2
4,159,541	+		RR42_RS19265	0.52	-0.2
4,159,613	+		RR42_RS19265	0.57	-0.5
4,159,613	+		RR42_RS19265	0.57	+2.4
4,159,613	+		RR42_RS19265	0.57	-0.5
4,159,613	+		RR42_RS19265	0.57	+0.8
4,159,613	+		RR42_RS19265	0.57	-2.5
4,159,613	+		RR42_RS19265	0.57	+1.2
4,159,613	+		RR42_RS19265	0.57	+0.5
4,159,614	-		RR42_RS19265	0.57	+1.4
4,159,614	-		RR42_RS19265	0.57	+0.5
4,159,614	-		RR42_RS19265	0.57	+0.9
4,159,614	-		RR42_RS19265	0.57	+0.4
4,159,614	-		RR42_RS19265	0.57	+0.3
4,159,614	-		RR42_RS19265	0.57	+0.1
4,159,614	-		RR42_RS19265	0.57	+2.0