Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19025

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,120,694	-		RR42_RS19015	0.82	+2.8
4,120,694	-		RR42_RS19015	0.82	-2.3
4,120,784	+		RR42_RS19015	0.86	+0.4
4,120,830	+		RR42_RS19015	0.88	-0.8
4,120,830	+		RR42_RS19015	0.88	-0.6
4,121,036	+				+0.5
4,121,205	-		RR42_RS19020	0.22	-0.3
4,121,219	+		RR42_RS19020	0.24	-1.3
4,121,220	-		RR42_RS19020	0.25	+0.4
4,121,250	+		RR42_RS19020	0.30	+0.3
4,121,250	+		RR42_RS19020	0.30	-0.3
4,121,250	+		RR42_RS19020	0.30	+0.9
4,121,251	-		RR42_RS19020	0.30	-0.1
4,121,251	-		RR42_RS19020	0.30	-0.9
4,121,251	-		RR42_RS19020	0.30	+0.6
4,121,251	-		RR42_RS19020	0.30	-3.1
4,121,251	-		RR42_RS19020	0.30	+0.4
4,121,251	-		RR42_RS19020	0.30	-0.3
4,121,251	-		RR42_RS19020	0.30	-1.6
4,121,251	-		RR42_RS19020	0.30	-1.0
4,121,254	+		RR42_RS19020	0.31	-0.7
4,121,255	-		RR42_RS19020	0.31	+1.5
4,121,255	-		RR42_RS19020	0.31	+0.4
4,121,255	-		RR42_RS19020	0.31	-1.0
4,121,255	-		RR42_RS19020	0.31	+0.5
4,121,270	+		RR42_RS19020	0.34	+0.5
4,121,270	+		RR42_RS19020	0.34	+1.0
4,121,270	+		RR42_RS19020	0.34	-2.0
4,121,270	+		RR42_RS19020	0.34	-0.3
4,121,450	+		RR42_RS19020	0.68	-0.6
4,121,450	+		RR42_RS19020	0.68	+0.6
4,121,450	+		RR42_RS19020	0.68	+1.3
4,121,450	+		RR42_RS19020	0.68	+1.0
4,121,451	-		RR42_RS19020	0.68	-0.7
4,121,451	-		RR42_RS19020	0.68	-0.2
4,121,451	-		RR42_RS19020	0.68	+0.4
4,121,451	-		RR42_RS19020	0.68	+0.7
4,121,451	-		RR42_RS19020	0.68	-0.7
4,121,870	-		RR42_RS19025	0.37	+0.4
4,121,972	+		RR42_RS19025	0.52	-1.4
4,121,973	-		RR42_RS19025	0.52	+3.8
4,121,973	-		RR42_RS19025	0.52	-0.0
4,122,073	+		RR42_RS19025	0.67	+0.6
4,122,074	-		RR42_RS19025	0.67	+1.1
4,122,074	-		RR42_RS19025	0.67	+0.8
4,122,074	-		RR42_RS19025	0.67	-1.1
4,122,074	-		RR42_RS19025	0.67	+0.8
4,122,074	-		RR42_RS19025	0.67	-1.7
4,122,074	-		RR42_RS19025	0.67	+1.6
4,122,139	+		RR42_RS19025	0.76	-2.2
4,122,139	+		RR42_RS19025	0.76	+0.0
4,122,140	-		RR42_RS19025	0.77	+1.7
4,122,140	-		RR42_RS19025	0.77	-0.8
4,122,388	-		RR42_RS19030	0.13	-0.5
4,122,500	-		RR42_RS19030	0.31	-3.0
4,122,557	-		RR42_RS19030	0.40	+0.6
4,122,557	-		RR42_RS19030	0.40	+1.6
4,122,591	+		RR42_RS19030	0.45	+0.9
4,122,592	-		RR42_RS19030	0.45	+1.0
4,122,700	+		RR42_RS19030	0.62	+0.4
4,122,701	-		RR42_RS19030	0.62	+1.6
4,122,807	+		RR42_RS19030	0.78	+0.7
4,122,807	+		RR42_RS19030	0.78	-0.5
4,122,807	+		RR42_RS19030	0.78	-0.6
4,122,807	+		RR42_RS19030	0.78	-2.0
4,122,807	+		RR42_RS19030	0.78	-0.5
4,122,807	+		RR42_RS19030	0.78	-1.8
4,122,807	+		RR42_RS19030	0.78	-1.1
4,122,807	+		RR42_RS19030	0.78	+1.2
4,122,808	-		RR42_RS19030	0.78	+0.8
4,122,808	-		RR42_RS19030	0.78	-0.9
4,122,808	-		RR42_RS19030	0.78	-1.2
4,122,867	+		RR42_RS19030	0.88	+0.4
4,122,867	+		RR42_RS19030	0.88	+0.1
4,122,867	+		RR42_RS19030	0.88	-0.8
4,122,867	+		RR42_RS19030	0.88	+1.9
4,122,868	-		RR42_RS19030	0.88	+0.0
4,122,906	+				+1.1
4,123,005	+				+1.0
4,123,005	+				-0.6
4,123,005	+				+0.6
4,123,005	+				+1.7
4,123,006	-				-0.3
4,123,029	+				-0.6
4,123,279	+		RR42_RS19035	0.29	+0.6
4,123,279	+		RR42_RS19035	0.29	+0.0
4,123,279	+		RR42_RS19035	0.29	-0.1
4,123,279	+		RR42_RS19035	0.29	-1.4
4,123,279	+		RR42_RS19035	0.29	-1.0
4,123,279	+		RR42_RS19035	0.29	+1.0
4,123,280	-		RR42_RS19035	0.29	+1.8
4,123,280	-		RR42_RS19035	0.29	+0.5
4,123,280	-		RR42_RS19035	0.29	-0.1
4,123,280	-		RR42_RS19035	0.29	+0.5