Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18905

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,093,387	-				+0.0
4,093,387	-				+0.0
4,093,505	-		RR42_RS18900	0.24	-1.4
4,093,505	-		RR42_RS18900	0.24	+0.6
4,093,508	-		RR42_RS18900	0.24	-0.1
4,093,508	-		RR42_RS18900	0.24	+0.3
4,093,508	-		RR42_RS18900	0.24	-2.2
4,093,508	-		RR42_RS18900	0.24	-1.0
4,093,508	-		RR42_RS18900	0.24	-1.2
4,093,508	-		RR42_RS18900	0.24	-1.2
4,093,508	-		RR42_RS18900	0.24	-0.8
4,093,509	+		RR42_RS18900	0.24	-1.5
4,093,510	-		RR42_RS18900	0.25	+0.2
4,093,510	-		RR42_RS18900	0.25	-0.9
4,093,510	-		RR42_RS18900	0.25	-2.7
4,093,510	-		RR42_RS18900	0.25	-0.5
4,093,510	-		RR42_RS18900	0.25	-1.0
4,093,510	-		RR42_RS18900	0.25	-0.1
4,093,510	-		RR42_RS18900	0.25	+0.0
4,093,510	-		RR42_RS18900	0.25	-1.0
4,093,510	-		RR42_RS18900	0.25	-3.2
4,093,510	-		RR42_RS18900	0.25	+0.8
4,093,510	-		RR42_RS18900	0.25	-1.3
4,093,510	-		RR42_RS18900	0.25	-1.0
4,093,510	-		RR42_RS18900	0.25	+0.5
4,093,512	-		RR42_RS18900	0.25	-1.9
4,093,512	-		RR42_RS18900	0.25	+0.1
4,093,512	-		RR42_RS18900	0.25	+0.1
4,093,512	-		RR42_RS18900	0.25	-1.5
4,093,512	-		RR42_RS18900	0.25	+0.7
4,093,512	-		RR42_RS18900	0.25	-1.3
4,093,512	-		RR42_RS18900	0.25	-0.2
4,093,514	-		RR42_RS18900	0.25	+1.5
4,093,514	-		RR42_RS18900	0.25	+0.0
4,093,514	-		RR42_RS18900	0.25	+1.3
4,093,514	-		RR42_RS18900	0.25	-0.6
4,093,514	-		RR42_RS18900	0.25	-0.6
4,093,587	-		RR42_RS18900	0.37	+0.0
4,093,625	-		RR42_RS18900	0.43	+1.9
4,093,785	+		RR42_RS18900	0.69	-1.8
4,093,785	+		RR42_RS18900	0.69	-2.0
4,093,785	+		RR42_RS18900	0.69	+1.3
4,093,786	-		RR42_RS18900	0.69	-1.8
4,093,869	+		RR42_RS18900	0.82	-1.2
4,093,869	+		RR42_RS18900	0.82	-0.3
4,093,869	+		RR42_RS18900	0.82	-0.6
4,093,869	+		RR42_RS18900	0.82	+1.9
4,093,870	-		RR42_RS18900	0.82	+1.9
4,093,870	-		RR42_RS18900	0.82	+1.6
4,093,870	-		RR42_RS18900	0.82	-2.1
4,093,870	-		RR42_RS18900	0.82	+1.9
4,093,870	-		RR42_RS18900	0.82	+0.1
4,093,968	+				-0.3
4,093,968	+				+0.2
4,093,968	+				-2.9
4,093,969	-				-0.8
4,093,969	-				+0.4
4,093,969	-				+0.7
4,093,969	-				-1.0
4,093,969	-				+0.3
4,093,975	-				+2.9
4,093,975	-				+0.8
4,093,991	+				-0.7
4,093,991	+				-3.0
4,093,992	-				-1.2
4,093,992	-				-0.9