Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18805

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
4,077,747	+		RR42_RS18795	0.43	+0.3
4,077,748	-		RR42_RS18795	0.43	+0.3
4,077,748	-		RR42_RS18795	0.43	+0.3
4,077,768	+		RR42_RS18795	0.51	-0.3
4,077,769	-		RR42_RS18795	0.51	+1.3
4,077,769	-		RR42_RS18795	0.51	+0.3
4,077,769	-		RR42_RS18795	0.51	+1.3
4,077,770	+		RR42_RS18795	0.51	+2.6
4,077,770	+		RR42_RS18795	0.51	+0.7
4,077,770	+		RR42_RS18795	0.51	+0.1
4,077,770	+		RR42_RS18795	0.51	-0.7
4,077,770	+		RR42_RS18795	0.51	+0.2
4,077,770	+		RR42_RS18795	0.51	-2.9
4,077,770	+		RR42_RS18795	0.51	-1.8
4,077,770	+		RR42_RS18795	0.51	-3.2
4,077,770	+		RR42_RS18795	0.51	-1.1
4,077,771	-		RR42_RS18795	0.52	+3.0
4,077,771	-		RR42_RS18795	0.52	-0.2
4,077,771	-		RR42_RS18795	0.52	-2.8
4,077,771	-		RR42_RS18795	0.52	-2.0
4,077,771	-		RR42_RS18795	0.52	+1.3
4,077,771	-		RR42_RS18795	0.52	-1.0
4,077,771	-		RR42_RS18795	0.52	+0.8
4,077,771	-		RR42_RS18795	0.52	-0.7
4,077,853	+		RR42_RS18795	0.82	+0.5
4,077,853	+		RR42_RS18795	0.82	+0.3
4,077,853	+		RR42_RS18795	0.82	-0.6
4,077,854	-		RR42_RS18795	0.83	-0.6
4,077,854	-		RR42_RS18795	0.83	-0.9
4,077,854	-		RR42_RS18795	0.83	-0.1
4,077,854	-		RR42_RS18795	0.83	-0.5
4,077,958	+				-1.5
4,077,958	+				-0.1
4,077,959	-				+0.6
4,077,959	-				+1.2
4,077,959	-				-1.2
4,077,959	-				-0.3
4,078,002	-				-0.4
4,078,055	+				+1.2
4,078,055	+				-0.8
4,078,055	+				-1.9
4,078,055	+				+0.3
4,078,055	+				+0.3
4,078,055	+				-2.6
4,078,055	+				+1.0
4,078,055	+				+0.3
4,078,055	+				-2.9
4,078,055	+				-1.7
4,078,056	-				+0.1
4,078,056	-				-0.2
4,078,056	-				-1.7
4,078,056	-				-1.8
4,078,056	-				-2.1
4,078,056	-				-1.1
4,078,056	-				-0.7
4,078,056	-				-0.8
4,078,057	+				-0.5
4,078,057	+				+0.1
4,078,057	+				-1.3
4,078,156	+				-0.6
4,078,157	-				-0.3
4,078,157	-				-0.2
4,078,157	-				-1.0
4,078,171	+				+0.4
4,078,171	+				+0.0
4,078,172	-				-1.5
4,078,172	-				-0.2
4,078,175	+				-1.5
4,078,175	+				-0.3
4,078,226	+				-1.0
4,078,226	+				-1.2
4,078,226	+				+0.1
4,078,226	+				+1.2
4,078,227	-				-1.7
4,078,227	-				+0.3
4,078,230	+				+0.2
4,078,231	-				-1.8
4,078,231	-				-0.4
4,078,237	+				-0.6
4,078,237	+				-0.4
4,078,237	+				+1.0
4,078,237	+				+1.2
4,078,237	+				-0.2
4,078,237	+				-1.2
4,078,238	-				+0.5
4,078,238	-				-2.0
4,078,238	-				+1.0
4,078,238	-				+0.3
4,078,351	+				-1.7
4,078,352	-				+0.5
4,078,359	-				+0.8
4,078,368	+				-0.4
4,078,368	+				+1.3
4,078,368	+				-0.8
4,078,368	+				-0.9
4,078,369	-				+0.2
4,078,369	-				+0.1
4,078,369	-				+1.2
4,078,369	-				+1.3
4,078,369	-				-0.5
4,078,369	-				+1.3
4,078,595	-				+0.3
4,078,633	+				-2.0
4,078,633	+				-1.5
4,078,633	+				-3.1
4,078,633	+				-1.5
4,078,634	-				+0.6
4,078,634	-				+0.2
4,078,861	+		RR42_RS18805	0.46	-0.6
4,078,861	+		RR42_RS18805	0.46	-0.6
4,078,862	-		RR42_RS18805	0.46	-0.1
4,078,862	-		RR42_RS18805	0.46	-0.6
4,079,053	+		RR42_RS18805	0.85	-1.8
4,079,086	+				-1.8
4,079,086	+				-2.1
4,079,087	-				+3.0
4,079,087	-				-0.3
4,079,104	+				+2.9
4,079,105	-				+1.7
4,079,865	-				-0.4
4,079,899	+				+0.8
4,079,919	+				-1.0
4,079,920	-				+0.9
4,079,943	-				+0.3
4,079,943	-				+1.0
4,080,065	-				-1.4
4,080,082	+				-0.1