Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18250

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,955,450	-				-2.7
3,955,499	+				-2.0
3,955,499	+				-2.5
3,955,499	+				-2.0
3,955,500	-				+0.3
3,955,510	-				-0.4
3,955,638	+		RR42_RS18250	0.17	-0.1
3,956,037	+		RR42_RS18250	0.68	-1.0
3,956,049	+		RR42_RS18250	0.70	+0.3
3,956,049	+		RR42_RS18250	0.70	+0.9
3,956,049	+		RR42_RS18250	0.70	-0.2
3,956,049	+		RR42_RS18250	0.70	+0.3
3,956,049	+		RR42_RS18250	0.70	-1.3
3,956,050	-		RR42_RS18250	0.70	-0.6
3,956,050	-		RR42_RS18250	0.70	+0.4
3,956,059	+		RR42_RS18250	0.71	-1.4
3,956,059	+		RR42_RS18250	0.71	-1.4
3,956,059	+		RR42_RS18250	0.71	-1.3
3,956,060	-		RR42_RS18250	0.71	+0.3
3,956,060	-		RR42_RS18250	0.71	-0.0
3,956,060	-		RR42_RS18250	0.71	+0.1
3,956,060	-		RR42_RS18250	0.71	+0.3
3,956,060	-		RR42_RS18250	0.71	+0.1
3,956,060	-		RR42_RS18250	0.71	+0.0
3,956,060	-		RR42_RS18250	0.71	-1.1
3,956,060	-		RR42_RS18250	0.71	-1.0
3,956,060	-		RR42_RS18250	0.71	+0.3
3,956,061	+		RR42_RS18250	0.71	-1.1
3,956,061	+		RR42_RS18250	0.71	-0.7
3,956,061	+		RR42_RS18250	0.71	-0.3
3,956,061	+		RR42_RS18250	0.71	-2.7
3,956,061	+		RR42_RS18250	0.71	+0.1
3,956,061	+		RR42_RS18250	0.71	+0.3
3,956,062	-		RR42_RS18250	0.71	-0.8
3,956,062	-		RR42_RS18250	0.71	-0.3
3,956,062	-		RR42_RS18250	0.71	-0.9
3,956,062	-		RR42_RS18250	0.71	+0.1
3,956,062	-		RR42_RS18250	0.71	+2.3
3,956,062	-		RR42_RS18250	0.71	+0.6
3,956,062	-		RR42_RS18250	0.71	-2.6
3,956,062	-		RR42_RS18250	0.71	-0.9
3,956,067	+		RR42_RS18250	0.72	-1.0
3,956,067	+		RR42_RS18250	0.72	+0.1
3,956,067	+		RR42_RS18250	0.72	+0.0
3,956,068	-		RR42_RS18250	0.72	-1.0
3,956,068	-		RR42_RS18250	0.72	+0.7
3,956,201	-		RR42_RS18250	0.89	-0.8
3,956,277	+				+0.6
3,956,277	+				-2.0
3,956,278	-				-0.3
3,956,353	-				-0.3
3,956,375	+				+1.6
3,956,428	+				+0.3
3,956,428	+				+0.3
3,956,428	+				-0.5
3,956,428	+				+0.3
3,956,428	+				-0.7
3,956,429	-				-0.7
3,956,429	-				-0.1
3,956,430	+				+0.1
3,956,430	+				+0.5
3,956,430	+				-2.4
3,956,430	+				+0.6
3,956,430	+				+1.3
3,956,431	-				+0.5
3,956,431	-				-1.2
3,956,431	-				-0.7
3,956,431	-				-3.1
3,956,431	-				+1.3
3,956,431	-				-0.6
3,956,431	-				-0.9
3,956,431	-				+0.7
3,956,431	-				-2.3
3,956,432	+				-0.8
3,956,432	+				-0.5
3,956,432	+				+2.1
3,956,432	+				+0.2
3,956,432	+				-0.9
3,956,432	+				+1.2
3,956,432	+				-0.7
3,956,432	+				+0.2
3,956,432	+				+0.6
3,956,433	-				+1.1
3,956,433	-				-1.8
3,956,433	-				-0.2
3,956,433	-				-0.5
3,956,433	-				-0.0
3,956,434	+				-0.3
3,956,434	+				+0.2
3,956,434	+				-0.5
3,956,434	+				+0.4
3,956,434	+				+0.3
3,956,435	-				+0.2
3,956,435	-				-1.3
3,956,435	-				-0.4
3,956,435	-				-0.3
3,956,435	-				+0.3
3,956,435	-				+0.3
3,956,435	-				+0.2
3,956,435	-				+0.3
3,956,435	-				+0.1
3,956,435	-				-0.4
3,956,435	-				-1.3
3,956,458	+				-1.5
3,956,458	+				+1.3
3,956,458	+				-3.2
3,956,458	+				-0.5
3,956,458	+				-0.8
3,956,459	-				-1.1
3,956,593	+				+0.0
3,956,593	+				+1.0
3,956,593	+				-0.4
3,956,594	-				-0.3
3,956,594	-				+0.1
3,956,594	-				-2.3
3,956,594	-				-0.4
3,956,599	+				+2.6
3,956,622	+		RR42_RS18255	0.12	+1.3
3,956,623	-		RR42_RS18255	0.12	-2.0
3,956,623	-		RR42_RS18255	0.12	-0.3
3,956,623	-		RR42_RS18255	0.12	-0.7
3,957,161	+		RR42_RS18255	0.82	-0.6
3,957,161	+		RR42_RS18255	0.82	-0.3
3,957,162	-		RR42_RS18255	0.82	-0.3
3,957,162	-		RR42_RS18255	0.82	-0.8