Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17580

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,805,431	+				-2.6
3,805,432	-				+0.7
3,805,432	-				+0.8
3,805,432	-				-1.1
3,805,635	+		RR42_RS17580	0.16	-1.7
3,805,635	+		RR42_RS17580	0.16	-0.9
3,805,635	+		RR42_RS17580	0.16	+0.3
3,805,635	+		RR42_RS17580	0.16	+0.2
3,805,636	-		RR42_RS17580	0.16	-0.4
3,805,636	-		RR42_RS17580	0.16	-1.8
3,805,636	-		RR42_RS17580	0.16	+0.1
3,805,636	-		RR42_RS17580	0.16	+0.5
3,805,765	-		RR42_RS17580	0.31	-0.9
3,805,926	+		RR42_RS17580	0.50	-0.6
3,806,072	-		RR42_RS17580	0.68	+0.8
3,806,258	+				-1.5
3,806,258	+				-3.5
3,806,339	+				-1.1
3,806,339	+				+1.9
3,806,340	-				+0.5
3,806,450	+				-1.7
3,806,489	+		RR42_RS17585	0.17	-1.6
3,806,489	+		RR42_RS17585	0.17	+0.9
3,806,490	-		RR42_RS17585	0.17	-0.6
3,806,490	-		RR42_RS17585	0.17	-0.2
3,806,490	-		RR42_RS17585	0.17	-0.9
3,806,490	-		RR42_RS17585	0.17	-2.3
3,806,564	+		RR42_RS17585	0.34	+0.7
3,806,564	+		RR42_RS17585	0.34	+0.9
3,806,565	-		RR42_RS17585	0.34	-0.8
3,806,663	+		RR42_RS17585	0.56	+0.5
3,806,663	+		RR42_RS17585	0.56	-2.1
3,806,663	+		RR42_RS17585	0.56	+0.5
3,806,663	+		RR42_RS17585	0.56	-0.2
3,806,664	-		RR42_RS17585	0.57	-0.4
3,806,664	-		RR42_RS17585	0.57	-3.6
3,806,664	-		RR42_RS17585	0.57	-0.0
3,806,664	-		RR42_RS17585	0.57	+0.5
3,806,669	+		RR42_RS17585	0.58	+0.7
3,806,669	+		RR42_RS17585	0.58	+1.5
3,806,669	+		RR42_RS17585	0.58	+0.1
3,806,670	-		RR42_RS17585	0.58	+0.5
3,806,762	+		RR42_RS17585	0.79	+0.1
3,807,327	-		RR42_RS17590	0.62	+0.5
3,807,327	-		RR42_RS17590	0.62	+1.2