Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17390

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,761,789	+		RR42_RS17385	0.17	+2.3
3,761,789	+		RR42_RS17385	0.17	+3.0
3,761,789	+		RR42_RS17385	0.17	+1.8
3,761,790	-		RR42_RS17385	0.17	+3.8
3,761,790	-		RR42_RS17385	0.17	+5.5
3,761,874	+		RR42_RS17385	0.26	+4.0
3,761,874	+		RR42_RS17385	0.26	+3.4
3,761,874	+		RR42_RS17385	0.26	+2.5
3,761,874	+		RR42_RS17385	0.26	+2.2
3,761,875	-		RR42_RS17385	0.26	+3.3
3,761,948	-		RR42_RS17385	0.34	+1.7
3,762,098	+		RR42_RS17385	0.49	+3.1
3,762,099	-		RR42_RS17385	0.50	+3.4
3,762,197	+		RR42_RS17385	0.60	+2.6
3,762,197	+		RR42_RS17385	0.60	+3.0
3,762,197	+		RR42_RS17385	0.60	+3.0
3,762,197	+		RR42_RS17385	0.60	+3.4
3,762,198	-		RR42_RS17385	0.60	+2.9
3,762,198	-		RR42_RS17385	0.60	+2.2
3,762,269	+		RR42_RS17385	0.67	+2.2
3,762,270	-		RR42_RS17385	0.68	+2.2
3,762,284	+		RR42_RS17385	0.69	+0.3
3,762,284	+		RR42_RS17385	0.69	+1.9
3,762,284	+		RR42_RS17385	0.69	+2.1
3,762,285	-		RR42_RS17385	0.69	+3.1
3,762,557	+				+2.8
3,762,557	+				+3.8
3,762,557	+				+3.9
3,762,557	+				+2.5
3,762,558	-				+2.7
3,762,558	-				+2.0
3,762,558	-				+2.6
3,762,558	-				+2.8
3,762,558	-				+2.7
3,762,558	-				+2.6
3,762,558	-				+2.5
3,762,558	-				+2.8
3,762,663	+				+1.4
3,762,715	+				+0.8
3,762,716	-				-2.3
3,762,805	+				-3.2
3,762,991	+		RR42_RS17390	0.13	-4.8
3,762,991	+		RR42_RS17390	0.13	-0.6
3,762,992	-		RR42_RS17390	0.13	-1.8
3,763,325	-		RR42_RS17390	0.28	-0.4
3,763,462	+		RR42_RS17390	0.35	-1.5
3,763,463	-		RR42_RS17390	0.35	-2.9
3,763,465	+		RR42_RS17390	0.35	-2.5
3,763,466	-		RR42_RS17390	0.35	-3.7
3,763,466	-		RR42_RS17390	0.35	-3.2
3,763,816	+		RR42_RS17390	0.51	+0.2
3,764,344	+		RR42_RS17390	0.75	-2.9
3,764,757	-				-1.4
3,764,975	+				+0.5
3,765,012	+				+0.3
3,765,013	+				-1.8
3,765,013	+				+2.4
3,765,013	+				-1.0
3,765,013	+				-3.1
3,765,014	-				+0.7
3,765,014	-				-0.9
3,765,014	-				-0.4
3,765,014	-				-1.8
3,765,036	+				-0.1
3,765,036	+				-0.5
3,765,037	-				-0.2
3,765,114	+				+1.0
3,765,115	-				+2.8
3,765,247	+		RR42_RS17395	0.15	+0.2
3,765,248	-		RR42_RS17395	0.15	-0.4
3,765,248	-		RR42_RS17395	0.15	+0.7
3,765,386	+		RR42_RS17395	0.28	-1.6
3,765,386	+		RR42_RS17395	0.28	+0.2
3,765,544	+		RR42_RS17395	0.43	+1.5
3,765,544	+		RR42_RS17395	0.43	+0.2
3,765,544	+		RR42_RS17395	0.43	-0.8
3,765,544	+		RR42_RS17395	0.43	-1.2
3,765,544	+		RR42_RS17395	0.43	-1.0
3,765,544	+		RR42_RS17395	0.43	-1.0
3,765,545	-		RR42_RS17395	0.43	-0.8
3,765,545	-		RR42_RS17395	0.43	+0.4
3,765,545	-		RR42_RS17395	0.43	-0.3
3,765,545	-		RR42_RS17395	0.43	-0.3
3,765,778	+		RR42_RS17395	0.66	+0.5