Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17320

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,750,335	+		RR42_RS17315	0.54	+1.1
3,750,335	+		RR42_RS17315	0.54	-1.9
3,750,336	-		RR42_RS17315	0.54	+2.1
3,750,336	-		RR42_RS17315	0.54	+1.3
3,750,336	-		RR42_RS17315	0.54	+1.2
3,750,433	-				+0.2
3,750,462	+		RR42_RS17315	0.64	-1.0
3,750,606	+		RR42_RS17315	0.76	-0.8
3,750,606	+		RR42_RS17315	0.76	+0.2
3,750,607	-		RR42_RS17315	0.76	-0.2
3,750,735	+		RR42_RS17315	0.86	+0.7
3,750,736	-		RR42_RS17315	0.86	+1.9
3,750,736	-		RR42_RS17315	0.86	-1.2
3,750,736	-		RR42_RS17315	0.86	-1.5
3,750,763	-		RR42_RS17315	0.88	-0.9
3,750,830	+				+0.1
3,750,913	-				-0.4
3,750,913	-				-1.4
3,750,913	-				-0.3
3,751,136	+		RR42_RS17320	0.15	-2.1
3,751,136	+		RR42_RS17320	0.15	+1.4
3,751,137	-		RR42_RS17320	0.15	-3.1
3,751,492	+				+1.8
3,751,493	-				-1.6
3,751,527	+				-1.8
3,751,540	+		RR42_RS17325	0.11	-1.8
3,751,561	+		RR42_RS17325	0.14	-0.5
3,751,561	+		RR42_RS17325	0.14	+0.4
3,751,562	-		RR42_RS17325	0.14	+0.5
3,751,562	-		RR42_RS17325	0.14	+2.2
3,751,651	+		RR42_RS17325	0.26	+0.2
3,751,660	+		RR42_RS17325	0.27	+0.5
3,751,660	+		RR42_RS17325	0.27	+1.7
3,751,660	+		RR42_RS17325	0.27	-0.3
3,751,661	-		RR42_RS17325	0.28	+1.4
3,751,661	-		RR42_RS17325	0.28	-0.1
3,751,661	-		RR42_RS17325	0.28	-0.3
3,751,661	-		RR42_RS17325	0.28	+0.3
3,751,729	+		RR42_RS17325	0.37	-0.6
3,752,018	-		RR42_RS17325	0.77	+0.7
3,752,273	+		RR42_RS17330	0.13	-2.5
3,752,273	+		RR42_RS17330	0.13	-0.3
3,752,274	-		RR42_RS17330	0.13	-1.5
3,752,326	+		RR42_RS17330	0.26	-2.4
3,752,385	+		RR42_RS17330	0.40	-0.3
3,752,385	+		RR42_RS17330	0.40	-2.6
3,752,386	-		RR42_RS17330	0.40	+0.4
3,752,386	-		RR42_RS17330	0.40	+1.2
3,752,464	+		RR42_RS17330	0.60	+0.1
3,752,465	-		RR42_RS17330	0.60	+0.7