Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17300

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,745,053	-				-0.2
3,745,055	+				-1.4
3,745,055	+				+1.2
3,745,055	+				-2.5
3,745,055	+				-1.2
3,745,055	+				-1.2
3,745,056	-				+2.2
3,745,056	-				+0.1
3,745,056	-				+0.3
3,745,056	-				+0.0
3,745,056	-				-0.4
3,745,056	-				+1.2
3,745,056	-				-0.5
3,745,056	-				-0.1
3,745,056	-				+0.7
3,745,100	+				-1.8
3,745,134	-				+0.2
3,745,134	-				-1.5
3,745,403	+		RR42_RS17295	0.42	+1.9
3,745,443	+		RR42_RS17295	0.50	+0.4
3,745,456	+		RR42_RS17295	0.52	+0.5
3,745,456	+		RR42_RS17295	0.52	+0.5
3,745,456	+		RR42_RS17295	0.52	+0.3
3,745,456	+		RR42_RS17295	0.52	-0.6
3,745,456	+		RR42_RS17295	0.52	+0.1
3,745,456	+		RR42_RS17295	0.52	+0.7
3,745,456	+		RR42_RS17295	0.52	-0.5
3,745,456	+		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	+0.7
3,745,457	-		RR42_RS17295	0.52	-0.1
3,745,457	-		RR42_RS17295	0.52	-0.3
3,745,457	-		RR42_RS17295	0.52	+0.4
3,745,457	-		RR42_RS17295	0.52	+0.4
3,745,457	-		RR42_RS17295	0.52	-1.5
3,745,457	-		RR42_RS17295	0.52	-0.6
3,745,594	+		RR42_RS17295	0.78	+0.2
3,745,595	-		RR42_RS17295	0.79	+0.7
3,745,642	+		RR42_RS17295	0.88	+0.6
3,745,642	+		RR42_RS17295	0.88	-1.1
3,745,643	-		RR42_RS17295	0.88	-0.1
3,745,643	-		RR42_RS17295	0.88	+0.7
3,745,643	-		RR42_RS17295	0.88	-1.2
3,745,658	-				-1.3
3,745,705	+				-0.2
3,745,705	+				+0.1
3,745,705	+				+1.3
3,745,706	-				+0.5
3,745,742	+				+0.6
3,745,894	+				-0.5
3,745,894	+				-1.3
3,745,894	+				-1.0
3,745,894	+				+0.2
3,745,894	+				-0.1
3,745,895	-				-1.0
3,745,948	-				+0.6
3,746,085	-				-1.4
3,746,372	+		RR42_RS17300	0.28	+0.1
3,746,372	+		RR42_RS17300	0.28	+1.3
3,746,373	-		RR42_RS17300	0.28	-1.7
3,746,373	-		RR42_RS17300	0.28	-1.4
3,746,381	+		RR42_RS17300	0.28	-0.4
3,746,381	+		RR42_RS17300	0.28	-0.1
3,746,384	+		RR42_RS17300	0.28	-0.3
3,746,384	+		RR42_RS17300	0.28	+0.1
3,746,385	-		RR42_RS17300	0.28	+0.6
3,746,469	-		RR42_RS17300	0.34	+0.6
3,746,469	-		RR42_RS17300	0.34	-1.2
3,747,005	+		RR42_RS17300	0.70	+1.6
3,747,006	-		RR42_RS17300	0.70	+0.6
3,747,008	+		RR42_RS17300	0.70	+0.3
3,747,008	+		RR42_RS17300	0.70	+0.2
3,747,009	-		RR42_RS17300	0.70	+0.9
3,747,041	-		RR42_RS17300	0.72	-0.4
3,747,083	+		RR42_RS17300	0.75	+0.1
3,747,083	+		RR42_RS17300	0.75	+2.2
3,747,084	-		RR42_RS17300	0.75	+0.7
3,747,127	+		RR42_RS17300	0.78	-2.4
3,747,550	+				+0.8
3,747,550	+				+0.6
3,747,550	+				-1.6
3,747,550	+				-0.3
3,747,551	-				+0.2
3,747,663	-		RR42_RS17305	0.21	+0.7
3,747,720	+		RR42_RS17305	0.27	-0.0
3,747,913	+		RR42_RS17305	0.47	+0.9
3,747,913	+		RR42_RS17305	0.47	+0.2
3,747,913	+		RR42_RS17305	0.47	+1.9
3,748,024	+		RR42_RS17305	0.58	-0.1
3,748,024	+		RR42_RS17305	0.58	-0.8
3,748,024	+		RR42_RS17305	0.58	-1.2
3,748,024	+		RR42_RS17305	0.58	-0.4
3,748,024	+		RR42_RS17305	0.58	-0.1
3,748,024	+		RR42_RS17305	0.58	+0.3
3,748,024	+		RR42_RS17305	0.58	+0.9
3,748,024	+		RR42_RS17305	0.58	+0.5
3,748,024	+		RR42_RS17305	0.58	+0.6
3,748,025	-		RR42_RS17305	0.58	+1.4
3,748,076	-		RR42_RS17305	0.64	-2.8
3,748,175	-		RR42_RS17305	0.74	-0.4
3,748,301	-		RR42_RS17305	0.87	+0.3
3,748,333	+				-0.5
3,748,334	-				-2.8
3,748,431	+				-0.2
3,748,432	-				-1.0
3,748,432	-				-1.4
3,748,432	-				+1.2
3,748,432	-				+2.2
3,748,432	-				-0.1