Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16135

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,492,996	+				+0.2
3,493,238	+		RR42_RS16135	0.24	-2.9
3,493,239	-		RR42_RS16135	0.24	-0.8
3,493,239	-		RR42_RS16135	0.24	-0.1
3,493,411	+		RR42_RS16135	0.41	-2.9
3,493,411	+		RR42_RS16135	0.41	+2.1
3,493,412	-		RR42_RS16135	0.41	-2.9
3,493,735	+		RR42_RS16135	0.73	-0.5
3,493,735	+		RR42_RS16135	0.73	-0.2
3,493,736	-		RR42_RS16135	0.73	-1.5
3,493,736	-		RR42_RS16135	0.73	+0.8
3,494,089	+				+1.0
3,494,090	-				-1.1
3,494,148	-				-0.9
3,494,309	+		RR42_RS16140	0.15	+0.1
3,494,435	-		RR42_RS16140	0.21	-0.9
3,494,527	+		RR42_RS16140	0.26	-0.2
3,494,527	+		RR42_RS16140	0.26	+0.1
3,494,527	+		RR42_RS16140	0.26	+0.1
3,494,528	-		RR42_RS16140	0.26	+0.8
3,494,528	-		RR42_RS16140	0.26	-1.9
3,494,594	-		RR42_RS16140	0.30	+0.5
3,494,594	-		RR42_RS16140	0.30	+1.3
3,494,596	+		RR42_RS16140	0.30	+0.1
3,494,596	+		RR42_RS16140	0.30	-0.4
3,494,597	-		RR42_RS16140	0.30	+3.5
3,494,597	-		RR42_RS16140	0.30	+1.2
3,494,671	+		RR42_RS16140	0.34	+1.1
3,494,690	-		RR42_RS16140	0.35	+0.1
3,494,771	-		RR42_RS16140	0.39	+1.1
3,494,812	+		RR42_RS16140	0.41	-0.4
3,494,812	+		RR42_RS16140	0.41	-0.9
3,494,843	-		RR42_RS16140	0.42	-1.5
3,494,902	+		RR42_RS16140	0.45	+0.0