Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15530

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,354,325	+		RR42_RS15520	0.27	+0.2
3,354,325	+		RR42_RS15520	0.27	+0.2
3,354,326	-		RR42_RS15520	0.27	+0.1
3,354,326	-		RR42_RS15520	0.27	-0.5
3,354,397	+		RR42_RS15520	0.44	-0.6
3,354,415	+		RR42_RS15520	0.48	-0.7
3,354,415	+		RR42_RS15520	0.48	+0.8
3,354,481	+		RR42_RS15520	0.63	-0.1
3,354,482	-		RR42_RS15520	0.63	+1.0
3,354,526	+		RR42_RS15520	0.74	-1.0
3,354,526	+		RR42_RS15520	0.74	+0.8
3,354,527	-		RR42_RS15520	0.74	+0.7
3,354,527	-		RR42_RS15520	0.74	+0.5
3,354,527	-		RR42_RS15520	0.74	-0.1
3,354,715	+				-0.5
3,354,716	-				-2.5
3,354,756	-				+1.5
3,354,790	+				-0.4
3,354,998	-		RR42_RS15525	0.39	-1.4
3,355,378	-		RR42_RS15530	0.12	+0.4
3,355,458	-		RR42_RS15530	0.21	-1.3
3,355,556	+		RR42_RS15530	0.31	+0.7
3,355,557	-		RR42_RS15530	0.32	-0.5
3,355,726	-		RR42_RS15530	0.50	-1.1
3,355,746	+		RR42_RS15530	0.52	-1.0
3,355,746	+		RR42_RS15530	0.52	-0.5
3,355,746	+		RR42_RS15530	0.52	-0.4
3,355,746	+		RR42_RS15530	0.52	-1.7
3,355,746	+		RR42_RS15530	0.52	+0.1
3,355,746	+		RR42_RS15530	0.52	+0.6
3,355,746	+		RR42_RS15530	0.52	-1.0
3,355,746	+		RR42_RS15530	0.52	+1.7
3,355,746	+		RR42_RS15530	0.52	-0.2
3,355,746	+		RR42_RS15530	0.52	-1.7
3,355,747	-		RR42_RS15530	0.52	-0.2
3,355,747	-		RR42_RS15530	0.52	+0.1
3,355,747	-		RR42_RS15530	0.52	-0.4
3,355,747	-		RR42_RS15530	0.52	-2.0
3,355,747	-		RR42_RS15530	0.52	+0.2
3,355,748	+		RR42_RS15530	0.52	-1.2
3,355,749	-		RR42_RS15530	0.52	-1.2
3,355,791	+		RR42_RS15530	0.57	-0.1
3,355,792	-		RR42_RS15530	0.57	+0.5
3,355,970	-		RR42_RS15530	0.76	-3.1
3,355,970	-		RR42_RS15530	0.76	+0.8
3,356,042	+		RR42_RS15530	0.83	+1.6
3,356,043	-		RR42_RS15530	0.84	-1.5
3,356,043	-		RR42_RS15530	0.84	-0.3
3,356,165	+				-4.2
3,356,188	+				+0.5
3,356,188	+				-2.0
3,356,188	+				+0.0
3,356,188	+				-1.2
3,356,188	+				+1.0
3,356,188	+				+0.6
3,356,188	+				-0.5
3,356,188	+				-0.1
3,356,189	-				+0.6
3,356,189	-				-0.8
3,356,189	-				-2.0
3,356,342	+		RR42_RS15535	0.13	-1.7
3,356,342	+		RR42_RS15535	0.13	-0.3
3,356,443	-		RR42_RS15535	0.32	-1.1
3,356,446	+		RR42_RS15535	0.32	+0.5
3,356,661	-		RR42_RS15535	0.71	-2.5
3,356,715	-		RR42_RS15535	0.81	+0.2
3,356,715	-		RR42_RS15535	0.81	+0.7
3,356,796	+				+0.4
3,356,796	+				-0.9
3,356,797	-				-0.7
3,356,797	-				-0.3
3,357,057	-				+0.1