Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15050

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,253,662	-		RR42_RS15045	0.54	-3.5
3,253,686	+		RR42_RS15045	0.55	+0.4
3,253,687	-		RR42_RS15045	0.56	-0.6
3,253,687	-		RR42_RS15045	0.56	+0.1
3,253,687	-		RR42_RS15045	0.56	-0.1
3,254,069	+		RR42_RS15045	0.84	-1.3
3,254,070	-		RR42_RS15045	0.84	-1.9
3,254,070	-		RR42_RS15045	0.84	+0.1
3,254,070	-		RR42_RS15045	0.84	-0.1
3,254,070	-		RR42_RS15045	0.84	+0.6
3,254,136	+		RR42_RS15045	0.89	-0.8
3,254,136	+		RR42_RS15045	0.89	+0.4
3,254,137	-		RR42_RS15045	0.89	+0.8
3,254,137	-		RR42_RS15045	0.89	+0.4
3,254,137	-		RR42_RS15045	0.89	+0.3
3,254,137	-		RR42_RS15045	0.89	-0.6
3,254,161	+				+0.4
3,254,243	-				-0.9
3,254,243	-				+1.0
3,254,243	-				-0.3
3,254,283	-				-0.7
3,254,478	+				-0.9
3,254,478	+				-0.4
3,254,479	-				+0.8
3,254,905	-		RR42_RS15050	0.15	-3.0
3,254,905	-		RR42_RS15050	0.15	-2.6
3,254,968	-		RR42_RS15050	0.17	-1.1
3,254,997	+		RR42_RS15050	0.18	-2.5
3,255,116	-		RR42_RS15050	0.23	-4.2
3,255,346	-		RR42_RS15050	0.31	-3.2
3,255,346	-		RR42_RS15050	0.31	-3.2
3,255,688	-		RR42_RS15050	0.43	-0.0
3,255,694	-		RR42_RS15050	0.43	-4.3
3,255,694	-		RR42_RS15050	0.43	-1.6
3,255,727	-		RR42_RS15050	0.44	-4.2
3,255,921	+		RR42_RS15050	0.51	-3.9
3,255,922	-		RR42_RS15050	0.51	-1.3
3,255,993	+		RR42_RS15050	0.54	-1.3
3,255,993	+		RR42_RS15050	0.54	-3.1
3,256,084	-		RR42_RS15050	0.57	-2.6
3,256,131	+		RR42_RS15050	0.59	-2.0
3,256,131	+		RR42_RS15050	0.59	-1.9
3,256,132	-		RR42_RS15050	0.59	-2.7
3,256,132	-		RR42_RS15050	0.59	-0.6
3,257,125	-				-1.8
3,257,370	-				-1.7
3,257,474	+				-0.9
3,257,474	+				-1.0
3,257,474	+				-0.4
3,257,597	+		RR42_RS15055	0.12	-2.7
3,257,597	+		RR42_RS15055	0.12	-0.1
3,257,598	-		RR42_RS15055	0.12	+0.6
3,257,658	+		RR42_RS15055	0.20	+1.0
3,257,659	-		RR42_RS15055	0.20	-0.0
3,257,694	+		RR42_RS15055	0.25	-0.0
3,257,694	+		RR42_RS15055	0.25	+1.0
3,257,695	-		RR42_RS15055	0.25	-0.2
3,257,695	-		RR42_RS15055	0.25	-1.3
3,257,695	-		RR42_RS15055	0.25	-0.2
3,258,165	+				+0.3
3,258,165	+				+0.6
3,258,165	+				+0.2
3,258,165	+				+0.1
3,258,171	+				+0.1
3,258,174	+				+0.5
3,258,174	+				-1.8
3,258,174	+				+0.6
3,258,175	-				-0.5
3,258,226	-				+1.6