Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14635

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,146,831	+		RR42_RS14630	0.38	-3.1
3,146,831	+		RR42_RS14630	0.38	+0.5
3,146,831	+		RR42_RS14630	0.38	-1.7
3,146,832	-		RR42_RS14630	0.38	+0.6
3,146,843	+		RR42_RS14630	0.39	-1.3
3,146,844	-		RR42_RS14630	0.39	+0.3
3,146,844	-		RR42_RS14630	0.39	-0.4
3,146,846	+		RR42_RS14630	0.39	-0.0
3,146,847	-		RR42_RS14630	0.39	+0.4
3,146,847	-		RR42_RS14630	0.39	+0.3
3,146,856	+		RR42_RS14630	0.40	-0.6
3,146,856	+		RR42_RS14630	0.40	+0.4
3,146,857	-		RR42_RS14630	0.40	-0.5
3,146,857	-		RR42_RS14630	0.40	-0.3
3,146,857	-		RR42_RS14630	0.40	-1.2
3,146,857	-		RR42_RS14630	0.40	+1.0
3,146,858	+		RR42_RS14630	0.40	-0.2
3,146,859	-		RR42_RS14630	0.40	-3.2
3,146,859	-		RR42_RS14630	0.40	-0.9
3,147,153	-		RR42_RS14630	0.63	+0.5
3,147,153	-		RR42_RS14630	0.63	-0.8
3,147,153	-		RR42_RS14630	0.63	-0.5
3,147,180	-		RR42_RS14630	0.65	-0.4
3,147,287	+		RR42_RS14630	0.73	-1.0
3,147,288	-		RR42_RS14630	0.73	+0.0
3,147,377	+		RR42_RS14630	0.80	+1.0
3,147,377	+		RR42_RS14630	0.80	-0.3
3,147,377	+		RR42_RS14630	0.80	+1.1
3,147,377	+		RR42_RS14630	0.80	-0.6
3,147,479	+		RR42_RS14630	0.87	-0.3
3,147,479	+		RR42_RS14630	0.87	-2.2
3,147,480	-		RR42_RS14630	0.88	+0.3
3,147,480	-		RR42_RS14630	0.88	+0.6
3,147,512	+				+0.4
3,147,513	-				+0.1
3,147,513	-				+0.3
3,147,647	+				+0.8
3,147,647	+				+0.4
3,147,648	-				+0.8
3,147,663	+				+2.0
3,147,664	-				+0.2
3,147,722	+				-0.4
3,148,168	+		RR42_RS14635	0.24	-1.2
3,148,168	+		RR42_RS14635	0.24	+0.7
3,148,169	-		RR42_RS14635	0.25	-0.6
3,148,169	-		RR42_RS14635	0.25	-0.2
3,148,169	-		RR42_RS14635	0.25	+1.5
3,148,169	-		RR42_RS14635	0.25	-0.8
3,148,288	+		RR42_RS14635	0.33	-2.8
3,148,288	+		RR42_RS14635	0.33	-0.6
3,148,289	-		RR42_RS14635	0.33	-2.6
3,148,289	-		RR42_RS14635	0.33	+0.0
3,148,289	-		RR42_RS14635	0.33	+0.5
3,148,355	+		RR42_RS14635	0.38	-1.3
3,148,445	-		RR42_RS14635	0.44	+0.0
3,148,445	-		RR42_RS14635	0.44	-1.8
3,148,445	-		RR42_RS14635	0.44	+0.0
3,148,445	-		RR42_RS14635	0.44	+0.2
3,148,477	+		RR42_RS14635	0.47	+0.1
3,148,477	+		RR42_RS14635	0.47	+0.6
3,148,477	+		RR42_RS14635	0.47	-0.4
3,148,478	-		RR42_RS14635	0.47	+1.1
3,148,777	+		RR42_RS14635	0.68	+1.5
3,148,885	+		RR42_RS14635	0.76	-0.7
3,148,885	+		RR42_RS14635	0.76	-0.7
3,148,885	+		RR42_RS14635	0.76	-0.2
3,148,885	+		RR42_RS14635	0.76	+0.8
3,148,885	+		RR42_RS14635	0.76	-1.0
3,148,886	-		RR42_RS14635	0.76	+2.2
3,148,939	+		RR42_RS14635	0.80	-0.7
3,148,939	+		RR42_RS14635	0.80	+0.8
3,148,940	-		RR42_RS14635	0.80	+1.0
3,149,081	-		RR42_RS14635	0.90	-0.2
3,149,228	-				-0.2
3,149,420	+				+0.3
3,149,421	-				-2.3
3,149,423	+				+0.1
3,149,424	-				-1.1
3,149,754	+		RR42_RS14640	0.29	-1.5
3,149,755	-		RR42_RS14640	0.29	-0.6
3,150,058	-		RR42_RS14640	0.49	+0.3
3,150,077	+		RR42_RS14640	0.50	-1.1
3,150,077	+		RR42_RS14640	0.50	+0.7
3,150,078	-		RR42_RS14640	0.50	-2.8
3,150,078	-		RR42_RS14640	0.50	-1.3
3,150,184	+		RR42_RS14640	0.57	+0.9