Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14560

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,133,010	-		RR42_RS14555	0.56	+0.0
3,133,043	-		RR42_RS14555	0.58	-2.3
3,133,082	-		RR42_RS14555	0.60	+1.0
3,133,082	-		RR42_RS14555	0.60	-0.2
3,133,093	+		RR42_RS14555	0.61	+1.2
3,133,094	-		RR42_RS14555	0.61	+2.0
3,133,178	-		RR42_RS14555	0.65	-0.6
3,133,459	+		RR42_RS14555	0.80	-1.0
3,133,460	-		RR42_RS14555	0.80	+0.2
3,133,857	-				-1.9
3,133,923	+				+1.2
3,133,923	+				-0.3
3,133,923	+				+0.3
3,133,924	-				+0.8
3,133,956	+				-0.5
3,133,957	-				+0.5
3,134,131	-				+0.9
3,134,131	-				-1.6
3,134,131	-				+0.9
3,134,193	+		RR42_RS14560	0.12	-0.3
3,134,194	-		RR42_RS14560	0.12	+2.2
3,134,194	-		RR42_RS14560	0.12	-0.7
3,134,194	-		RR42_RS14560	0.12	-0.5
3,134,331	+		RR42_RS14560	0.21	+0.4
3,134,331	+		RR42_RS14560	0.21	-0.5
3,134,472	+		RR42_RS14560	0.31	-3.0
3,134,473	-		RR42_RS14560	0.31	+2.3
3,134,473	-		RR42_RS14560	0.31	-3.1
3,134,473	-		RR42_RS14560	0.31	+0.2
3,134,473	-		RR42_RS14560	0.31	-0.1
3,134,544	+		RR42_RS14560	0.35	-1.5
3,134,544	+		RR42_RS14560	0.35	-1.0
3,134,544	+		RR42_RS14560	0.35	+1.4
3,134,544	+		RR42_RS14560	0.35	-1.2
3,134,545	-		RR42_RS14560	0.35	+0.7
3,134,545	-		RR42_RS14560	0.35	+0.7
3,134,545	-		RR42_RS14560	0.35	-0.4
3,134,545	-		RR42_RS14560	0.35	-0.6
3,134,574	+		RR42_RS14560	0.37	-0.7
3,134,575	-		RR42_RS14560	0.37	-2.2
3,134,575	-		RR42_RS14560	0.37	+0.2
3,134,575	-		RR42_RS14560	0.37	-0.0
3,134,575	-		RR42_RS14560	0.37	+1.0
3,134,727	+		RR42_RS14560	0.47	-0.3
3,134,728	-		RR42_RS14560	0.47	-0.6
3,134,728	-		RR42_RS14560	0.47	+0.1
3,134,827	-		RR42_RS14560	0.54	-0.1
3,134,827	-		RR42_RS14560	0.54	-0.4
3,134,827	-		RR42_RS14560	0.54	+0.2
3,135,070	+		RR42_RS14560	0.69	+0.1
3,135,071	-		RR42_RS14560	0.70	+1.3
3,135,071	-		RR42_RS14560	0.70	+0.9
3,135,071	-		RR42_RS14560	0.70	+0.3
3,135,071	-		RR42_RS14560	0.70	-1.1
3,135,071	-		RR42_RS14560	0.70	-0.2
3,135,071	-		RR42_RS14560	0.70	-0.6
3,135,071	-		RR42_RS14560	0.70	-4.0
3,135,183	+		RR42_RS14560	0.77	+1.3
3,135,183	+		RR42_RS14560	0.77	-0.8
3,135,183	+		RR42_RS14560	0.77	-0.9
3,135,183	+		RR42_RS14560	0.77	-0.7
3,135,183	+		RR42_RS14560	0.77	-0.6
3,135,184	-		RR42_RS14560	0.77	-1.8
3,135,214	-		RR42_RS14560	0.79	-1.2
3,135,237	+		RR42_RS14560	0.80	-1.3
3,135,238	-		RR42_RS14560	0.80	+0.3
3,135,499	+				-1.2
3,135,557	+				+1.2
3,135,575	+				+0.3
3,135,608	+				+0.1
3,135,608	+				-1.8
3,135,779	+		RR42_RS14565	0.23	+0.5
3,135,779	+		RR42_RS14565	0.23	+1.2
3,135,780	-		RR42_RS14565	0.23	+0.7
3,136,119	+		RR42_RS14565	0.72	+0.1
3,136,120	-		RR42_RS14565	0.72	-0.7
3,136,120	-		RR42_RS14565	0.72	+1.3
3,136,120	-		RR42_RS14565	0.72	-1.0
3,136,342	+				-0.2
3,136,342	+				-0.4
3,136,363	+				-1.3
3,136,438	+				-1.9
3,136,438	+				-0.0
3,136,439	-				+1.0
3,136,510	+		RR42_RS14570	0.15	+0.2
3,136,511	-		RR42_RS14570	0.15	+0.0
3,136,511	-		RR42_RS14570	0.15	+0.5