Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14285

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
3,068,977	+				-0.9
3,068,977	+				-0.9
3,068,977	+				-2.8
3,068,977	+				-2.0
3,069,002	+				+0.4
3,069,589	-				-2.2
3,069,590	+				-3.5
3,069,793	+				-0.6
3,069,794	-				+0.7
3,069,794	-				+0.9
3,069,794	-				+1.2
3,069,794	-				-0.6
3,069,794	-				-0.4
3,069,794	-				-1.0
3,069,813	-				-0.4
3,069,847	-				+0.5
3,069,847	-				+1.4
3,069,875	+				+0.8
3,069,875	+				+0.6
3,069,875	+				-1.6
3,069,875	+				-0.6
3,069,987	+				+0.2
3,069,988	-				+0.4
3,069,988	-				-0.5
3,070,014	-		RR42_RS14285	0.14	-2.0
3,070,048	+		RR42_RS14285	0.20	-1.4
3,070,292	-		RR42_RS14285	0.59	-0.3
3,070,300	+		RR42_RS14285	0.60	+1.0
3,070,301	-		RR42_RS14285	0.61	+0.1
3,070,427	-		RR42_RS14285	0.81	-0.7
3,070,427	-		RR42_RS14285	0.81	-0.4
3,070,505	+				+1.2
3,070,506	-				+0.5
3,070,506	-				-0.3
3,070,593	+				+0.9
3,070,595	+				-1.4
3,070,596	-				-0.9
3,070,596	-				+0.3
3,070,596	-				-0.4
3,070,596	-				-3.4
3,070,596	-				-0.9
3,070,640	+				-0.6
3,070,640	+				+1.2
3,070,641	-				+1.6
3,070,677	+				+0.1
3,070,685	+				-1.2
3,070,686	-				+1.0
3,070,686	-				+0.5
3,070,691	+				+1.0
3,070,808	+		RR42_RS14290	0.31	-0.1
3,070,808	+		RR42_RS14290	0.31	+0.1
3,070,809	-		RR42_RS14290	0.31	-0.3
3,070,809	-		RR42_RS14290	0.31	-0.3
3,070,836	-		RR42_RS14290	0.36	-0.9
3,070,836	-		RR42_RS14290	0.36	+1.1
3,070,904	+		RR42_RS14290	0.49	-0.1
3,070,904	+		RR42_RS14290	0.49	+1.2
3,071,274	+				+0.8
3,071,274	+				-1.1
3,071,334	+				+0.3
3,071,335	-				+2.6
3,071,344	+				+1.1
3,071,345	-				-1.6
3,071,345	-				-0.1
3,071,400	+				+0.1
3,071,400	+				+0.9
3,071,409	+				+1.1
3,071,409	+				-1.6
3,071,409	+				-1.0
3,071,409	+				-0.0
3,071,409	+				-0.7
3,071,409	+				+0.5
3,071,409	+				+0.8
3,071,410	-				-0.1
3,071,410	-				+0.4
3,071,410	-				-0.4
3,071,421	-				-0.0