Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13870

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,987,365	+				+0.2
2,987,366	-				+0.4
2,987,366	-				-1.8
2,987,366	-				+0.4
2,987,448	+		RR42_RS13865	0.31	-1.8
2,987,449	-		RR42_RS13865	0.31	+1.3
2,987,742	+				-1.9
2,987,743	-				-1.1
2,987,743	-				-0.4
2,987,865	+				-0.9
2,987,866	-				+2.0
2,987,897	+				-0.5
2,987,897	+				+1.5
2,987,897	+				-0.9
2,987,898	-				+0.5
2,987,898	-				-1.8
2,987,898	-				+0.5
2,987,898	-				+1.7
2,987,898	-				-1.5
2,987,898	-				+0.8
2,987,898	-				+0.5
2,987,898	-				-1.4
2,987,900	-				-1.8
2,987,930	-				-0.9
2,987,943	+				-0.8
2,987,944	-				-0.9
2,987,944	-				+0.6
2,987,969	+				+1.3
2,988,089	+				-0.5
2,988,089	+				+1.2
2,988,105	-				-0.5
2,988,156	+				+0.1
2,988,156	+				-0.3
2,988,157	-				-2.0
2,988,590	+				+3.2
2,988,590	+				-0.6
2,988,590	+				+0.9
2,988,591	-				-0.9
2,988,591	-				+0.8
2,988,591	-				-2.0
2,988,591	-				+0.9
2,988,591	-				+1.1
2,988,591	-				-0.6
2,988,591	-				-1.3
2,988,591	-				-1.3
2,988,592	+				+0.4
2,988,592	+				+0.2
2,988,592	+				+1.7
2,988,592	+				-1.7
2,988,592	+				+2.4
2,988,592	+				+1.0
2,988,592	+				+0.2
2,988,592	+				+1.0
2,988,592	+				-1.4
2,988,592	+				+0.2
2,988,593	-				+2.0
2,988,593	-				-0.9
2,988,593	-				-0.6
2,988,593	-				+1.0
2,988,593	-				-0.5
2,988,593	-				+0.4
2,988,593	-				+1.0
2,988,593	-				+0.5
2,988,595	+				-1.6
2,988,596	-				+0.5
2,988,760	+		RR42_RS13875	0.18	-0.7
2,988,760	+		RR42_RS13875	0.18	+1.0
2,988,760	+		RR42_RS13875	0.18	+1.2
2,988,760	+		RR42_RS13875	0.18	+0.9
2,988,761	-		RR42_RS13875	0.18	-0.2
2,988,761	-		RR42_RS13875	0.18	+0.6
2,988,761	-		RR42_RS13875	0.18	-0.5
2,988,847	+		RR42_RS13875	0.22	-0.2
2,989,111	+		RR42_RS13875	0.35	+5.5
2,989,112	-		RR42_RS13875	0.35	+0.3
2,989,143	+		RR42_RS13875	0.36	-0.1
2,989,144	+		RR42_RS13875	0.36	-0.2
2,989,144	+		RR42_RS13875	0.36	-0.9
2,989,144	+		RR42_RS13875	0.36	-0.5
2,989,180	+		RR42_RS13875	0.38	-1.0
2,989,180	+		RR42_RS13875	0.38	+0.7
2,989,181	-		RR42_RS13875	0.38	-0.0
2,989,181	-		RR42_RS13875	0.38	+0.8
2,989,249	+		RR42_RS13875	0.41	-0.6
2,989,250	-		RR42_RS13875	0.41	-1.6
2,989,250	-		RR42_RS13875	0.41	-0.1