Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13810

Experiment: R2A with D-Cycloserine 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with D-Cycloserine 0.5 mg/ml
2,978,370	-				-0.8
2,978,507	-		RR42_RS13805	0.11	+0.0
2,978,598	+		RR42_RS13805	0.22	+0.5
2,978,598	+		RR42_RS13805	0.22	+1.4
2,978,599	-		RR42_RS13805	0.22	-0.8
2,978,599	-		RR42_RS13805	0.22	-0.1
2,978,604	+		RR42_RS13805	0.23	+2.0
2,978,604	+		RR42_RS13805	0.23	+1.5
2,978,604	+		RR42_RS13805	0.23	+1.6
2,978,604	+		RR42_RS13805	0.23	-0.1
2,978,604	+		RR42_RS13805	0.23	-1.1
2,978,605	-		RR42_RS13805	0.23	-0.6
2,979,100	+		RR42_RS13805	0.80	+0.0
2,979,101	-		RR42_RS13805	0.80	-0.3
2,979,326	+				-0.8
2,979,326	+				-0.4
2,979,327	-				-0.4
2,979,331	+				-0.8
2,979,331	+				-0.3
2,979,331	+				-0.6
2,979,332	-				+0.0
2,979,497	+				-0.1
2,979,789	-		RR42_RS13810	0.27	-2.0
2,979,926	-		RR42_RS13810	0.36	+1.0
2,980,133	+		RR42_RS13810	0.49	-2.4
2,980,134	-		RR42_RS13810	0.49	-0.2
2,980,134	-		RR42_RS13810	0.49	-2.9
2,980,171	+		RR42_RS13810	0.52	-0.2
2,980,171	+		RR42_RS13810	0.52	-0.6
2,980,172	-		RR42_RS13810	0.52	-3.4
2,980,175	+		RR42_RS13810	0.52	+1.3
2,980,176	-		RR42_RS13810	0.52	-0.6
2,980,176	-		RR42_RS13810	0.52	-0.0
2,980,298	+		RR42_RS13810	0.60	+0.4
2,980,870	-				-0.6
2,980,967	+				+1.0
2,980,967	+				+1.0
2,980,967	+				-0.6
2,980,968	-				-0.3
2,980,968	-				-0.6
2,980,975	+				-0.6
2,980,975	+				+0.3
2,980,975	+				+0.4
2,980,976	-				+1.0
2,980,983	+				+0.4
2,980,983	+				+0.6
2,980,991	+				-0.2
2,980,992	-				-1.3
2,980,999	+				-0.2
2,980,999	+				+0.7
2,980,999	+				+1.4
2,980,999	+				-0.6
2,980,999	+				+0.8
2,980,999	+				-0.4
2,980,999	+				+0.9
2,980,999	+				+0.3
2,981,003	+				-0.7
2,981,003	+				+0.3
2,981,003	+				-0.3
2,981,641	-		RR42_RS13815	0.37	-0.8